Gene detail information of Glyur000696s00018510 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G58350.2 | 4.00E-20 | Putative serine esterase family protein |
| NR | XP_007161366.1 | 1.46E-31 | hypothetical protein PHAVU_001G063100g [Phaseolus vulgaris] |
| trEMBL | tr|V7CVR0|V7CVR0_PHAVU | 5.00E-32 | Uncharacterized protein {ECO:0000313|EMBL:ESW33360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00696 | 42392 | 44056 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000696s00018510.1 | PF12394.3 | DUF3657 | 89 | 136 | 1.70E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.698 |
| SRR1783600 | control | 13.266 |
| SRR1783602 | moderate drought stress | 8.806 |
| SRR1811619 | moderate drought stress | 7.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.778 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.234 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.671 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.675 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.022 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.513 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.201 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.663 |
| SRR2868004 | Drought Stress (root) | 11.470 |
| SRR2967015 | Control (root) | 10.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.059 |
| SRR9715740 | Leaf | 0.288 |
| SRR9715741 | Leaf | 1.404 |
| SRR9715739 | Root | 0.028 |
| SRR9715742 | Root | 0.231 |
| SRR9715743 | Root | 0.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.483 |
| SRR8749028 | MeJA induced 9h | 30.573 |
| SRR8749029 | MeJA induced 9h | 7.687 |
| SRR8749030 | Uninduced | 3.937 |
| SRR8749031 | Uninduced | 4.504 |
| SRR8749032 | Uninduced | 4.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.109 |
| SRR8400027 | Control - Root | 3.366 |