Gene detail information of Glyur000696s00018509 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49630.1 | 0 | amino acid permease 6 |
| NR | XP_004498452.1 | 0 | PREDICTED: amino acid permease 6-like [Cicer arietinum] |
| Swissprot | tr|P92934|AAP6_ARATH | 0 | Amino acid permease 6 |
| trEMBL | tr|G7I283|G7I283_MEDTR | 0 | Transmembrane amino acid transporter family protein {ECO:0000313|EMBL:AES58701.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00696 | 39086 | 45805 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000696s00018509.1 | PF01490.13 | Aa_trans | 26 | 453 | 4.10E-110 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.479 |
| SRR1783600 | control | 24.531 |
| SRR1783602 | moderate drought stress | 23.067 |
| SRR1811619 | moderate drought stress | 22.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.545 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.071 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.531 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.390 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 34.665 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.648 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 54.033 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 53.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 57.202 |
| SRR2868004 | Drought Stress (root) | 33.605 |
| SRR2967015 | Control (root) | 23.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 146.745 |
| SRR9715740 | Leaf | 183.678 |
| SRR9715741 | Leaf | 256.059 |
| SRR9715739 | Root | 13.358 |
| SRR9715742 | Root | 95.750 |
| SRR9715743 | Root | 76.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.867 |
| SRR8749028 | MeJA induced 9h | 4.052 |
| SRR8749029 | MeJA induced 9h | 1.392 |
| SRR8749030 | Uninduced | 7.267 |
| SRR8749031 | Uninduced | 1.177 |
| SRR8749032 | Uninduced | 2.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 63.880 |
| SRR8400027 | Control - Root | 46.695 |