Gene detail information of Glyur000696s00018501 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G58360.1 | 8.00E-114 | amino acid permease 1 |
| NR | XP_004498458.1 | 0 | PREDICTED: amino acid permease 1-like [Cicer arietinum] |
| Swissprot | tr|Q42400|AAP1_ARATH | 4.00E-143 | Amino acid permease 1 |
| trEMBL | tr|G7I265|G7I265_MEDTR | 0 | Transmembrane amino acid transporter family protein {ECO:0000313|EMBL:AES58683.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00696 | 6745 | 10144 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000696s00018501.1 | PF01490.13 | Aa_trans | 1 | 375 | 2.20E-66 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 76.407 |
| SRR1783600 | control | 76.906 |
| SRR1783602 | moderate drought stress | 47.537 |
| SRR1811619 | moderate drought stress | 48.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.370 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.524 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 85.479 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 85.745 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.787 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.761 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 61.944 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 61.653 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.531 |
| SRR2868004 | Drought Stress (root) | 44.666 |
| SRR2967015 | Control (root) | 57.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 113.140 |
| SRR9715740 | Leaf | 122.393 |
| SRR9715741 | Leaf | 113.447 |
| SRR9715739 | Root | 33.621 |
| SRR9715742 | Root | 43.715 |
| SRR9715743 | Root | 39.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.857 |
| SRR8749028 | MeJA induced 9h | 31.580 |
| SRR8749029 | MeJA induced 9h | 21.585 |
| SRR8749030 | Uninduced | 32.536 |
| SRR8749031 | Uninduced | 41.710 |
| SRR8749032 | Uninduced | 23.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 45.509 |
| SRR8400027 | Control - Root | 35.014 |