Gene detail information of Glyur000695s00020677 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G60680.1 | 2.00E-97 | NAD(P)-linked oxidoreductase superfamily protein |
| NR | XP_007147189.1 | 0 | hypothetical protein PHAVU_006G103300g [Phaseolus vulgaris] |
| COG | YP_004641887.1 | 7.00E-112 | auxin-induced protein PCNT115 [Paenibacillus mucilaginosus KNP414] |
| Swissprot | tr|C6TBN2|AKR1_SOYBN | 0 | Probable aldo-keto reductase 1 |
| trEMBL | tr|V7BQ91|V7BQ91_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW19183.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00695 | 117224 | 125252 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000695s00020677.1 | PF00248.16 | Aldo_ket_red | 17 | 310 | 2.30E-78 |
| Glyur000695s00020677.2 | PF00248.16 | Aldo_ket_red | 18 | 290 | 2.90E-68 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.942 |
| SRR1783600 | control | 13.283 |
| SRR1783602 | moderate drought stress | 15.115 |
| SRR1811619 | moderate drought stress | 14.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.250 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.439 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.713 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.533 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.070 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.894 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.260 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.654 |
| SRR2868004 | Drought Stress (root) | 118.234 |
| SRR2967015 | Control (root) | 48.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 31.584 |
| SRR9715740 | Leaf | 21.801 |
| SRR9715741 | Leaf | 38.846 |
| SRR9715739 | Root | 3.964 |
| SRR9715742 | Root | 13.856 |
| SRR9715743 | Root | 11.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 59.602 |
| SRR8749028 | MeJA induced 9h | 135.364 |
| SRR8749029 | MeJA induced 9h | 77.507 |
| SRR8749030 | Uninduced | 359.528 |
| SRR8749031 | Uninduced | 390.078 |
| SRR8749032 | Uninduced | 256.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.107 |
| SRR8400027 | Control - Root | 29.846 |