Gene detail information of Glyur000695s00020676 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22930.1 | 8.00E-51 | calmodulin-like 11 |
| NR | XP_003554707.1 | 4.25E-82 | PREDICTED: calmodulin-like protein 11-like [Glycine max] |
| COG | YP_001866396.1 | 5.00E-27 | signal transduction protein [Nostoc punctiforme PCC 73102] |
| Swissprot | tr|P04464|CALM_WHEAT | 9.00E-70 | Calmodulin |
| trEMBL | tr|I1NC91|I1NC91_SOYBN | 2.00E-82 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G43370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00695 | 116338 | 117210 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000695s00020676.1 | PF13499.1 | EF-hand_7 | 16 | 74 | 4.90E-13 |
| Glyur000695s00020676.1 | PF13499.1 | EF-hand_7 | 87 | 147 | 1.80E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.164 |
| SRR1783600 | control | 3.285 |
| SRR1783602 | moderate drought stress | 2.420 |
| SRR1811619 | moderate drought stress | 2.868 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.319 |
| SRR2868004 | Drought Stress (root) | 24.429 |
| SRR2967015 | Control (root) | 8.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.488 |
| SRR9715740 | Leaf | 0.808 |
| SRR9715741 | Leaf | 4.654 |
| SRR9715739 | Root | 1.851 |
| SRR9715742 | Root | 2.571 |
| SRR9715743 | Root | 2.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.599 |
| SRR8749028 | MeJA induced 9h | 1.021 |
| SRR8749029 | MeJA induced 9h | 2.981 |
| SRR8749030 | Uninduced | 55.291 |
| SRR8749031 | Uninduced | 65.754 |
| SRR8749032 | Uninduced | 15.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.737 |
| SRR8400027 | Control - Root | 9.724 |