Gene detail

Gene detail information of Glyur000695s00020670.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G28770.2	3.00E-64	bZIP transcription factor family protein
NR	KHN31462.1	5.79E-165	Light-inducible protein CPRF2 [Glycine soja]
Swissprot	tr\|Q99090\|CPRF2_PETCR	3.00E-119	Light-inducible protein CPRF2
trEMBL	tr\|I1JRM9\|I1JRM9_SOYBN	3.00E-165	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G40730.1}

Sequence

Transcript Sequence

>Glyur000695s00020670.1
ATGGAAAAAGTGTTCTCAGTGGAAGAGATATCGGAGCAGTATTGGGCGGGGGCGAGGGATGAGTCGTGCAAGGCTGAGTCGAAGATGAATCGGAGCGAGTCGGAGTGGGCTTTCCAGCAGTTTCTACAACAGGAAGCAGCAGGGGCTGCAGACAGCACTTGTTCTTCTTCTTCTTCCACGCTTGTTGACGTTAAACACAAAAAGGNTATCCCATTCCCAGCAGTGCCTCTTGATTCCGAGGACTACCACACTCTTCTCAAGACCAAACTCAATCTCGCATGCGCCGCCGTTGCTATGACTCGGGGATCTTTGGTCAAATCTCAAGATCCTGCCACTCTTCCTGACAGTGGATCACAGGCATCTAATCCTTCTGAAGTTGGATCTCGGGTCACTTTAANAGAATCTGTCCCTTCTGGAAATGATCCATCTAAATTATTACAAAATAAAGATGTCAAAGTACCTGTTGGGGTTCCTTCCATGCAAAAGAAACCTGCTGTTGCAATCAGGTCAACAACAAGTACTGGATCATCAAAAGAACAGTCAGATGANGAGGAAGCCGAGGGAGAGATCAATATGACTGAAAACACGAACCCTGCTGATGCAAAACGAGTAAGGAGGATGCTTTCTAATAGGGAGTCTGCCAGACGCTCAAGAAGAAGAAAGCAAGCTCATTTAACTGAGCTAGAAACACAGGTCTCTCAATTAAGNGGAGAAAATTCTTCATTGGTAAAGCGTTTAACAGATGTGACCCAGAAATACAACGATTCTGCTGTTGACAACAGAGTATTGAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACCGTCAAAAGACTTACTGGGTTGAACCCAATGTTTAATGCCATGTCTGAGATATCGTCAATGGGAATGTCGTTATATGATGGAAGCCCTTCTGAGGAGGCATCAGCTGATGCGTCTGTACCTGTGCAAGAGGACCCAAATCATCACTTTTGTCAACCCACTTCCAATAATCTTATGTCCAGTCATGATCTGAGAGGAGTCACCAATGGGAACTTGAGAGGCATTAATTCTTCAGCTGAAAGTGTTCAGCAGAAAACTGCTGTAGTGGTAGGTGGGAACAAGATAGGGAGAACAAATTCCCTGCCGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTTCAGATTCATGTAATGGAGAGCAGTAACAGATAATAGCTCAATCACATCATGATCTCATGAACATGTTATTCTTGAACAATTATTTGTTTCTGCTATTTGTAAGTAGAGGCATATTCTTGTTGACATTGAGCCTGATTGGTTTAACTTNTGCAAGTAGCAAACAGAAATATCACCAGCTAAGTTGCACTTTTTTTGTTTTCAAAGGAAATAACTACTCCTTCTGACAAATGTATGTTTGGAACATTGTCAATTGTAAAACAAGCATGCTCTGTATTGTAAATCAACTTATGTTTCTTAATCCATGGCCGATGTGTAACCTAGATTAGATATGATGGGGGCAAAGGAGTATATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00695	80094	84055	-

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000695s00020670.1	PF00170.16	bZIP_1	200	254	1.20E-14
Glyur000695s00020670.1	PF12498.3	bZIP_C	269	401	1.00E-37

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.821
SRR1783600	control	2.712
SRR1783602	moderate drought stress	3.090
SRR1811619	moderate drought stress	3.074

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.531
DRR006520	Root Summer glycyrrhizin high producing strain	5.545
DRR006521	Root Winter glycyrrhizin high producing strain	1.945
DRR006522	Root Winter glycyrrhizin high producing strain	1.761
DRR006523	Root Summer glycyrrhizin low producing strain	3.401
DRR006524	Root Summer glycyrrhizin low producing strain	3.534
DRR006525	Leaf Summer glycyrrhizin high producing strain	17.754
DRR006526	Leaf Summer glycyrrhizin high producing strain	17.694

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	28.510
SRR2868004	Drought Stress (root)	128.044
SRR2967015	Control (root)	239.956

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	30.792
SRR9715740	Leaf	28.629
SRR9715741	Leaf	38.354
SRR9715739	Root	0.988
SRR9715742	Root	5.369
SRR9715743	Root	4.540

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	37.039
SRR8749028	MeJA induced 9h	85.254
SRR8749029	MeJA induced 9h	66.396
SRR8749030	Uninduced	54.521
SRR8749031	Uninduced	343.240
SRR8749032	Uninduced	192.215

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.065
SRR8400027	Control - Root	15.694