Gene detail information of Glyur000694s00023260


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G27580.25.00E-38A20/AN1-like zinc finger family protein
NRXP_007150082.11.16E-79hypothetical protein PHAVU_005G125000g [Phaseolus vulgaris]
Swissprottr|Q9SJM6|SAP4_ARATH2.00E-55Zinc finger A20 and AN1 domain-containing stress-associated protein 4
trEMBLtr|V7BZK7|V7BZK7_PHAVU4.00E-80Uncharacterized protein {ECO:0000313|EMBL:ESW22076.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00694122001122471-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0008270  zinc ion binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000694s00023260.1PF01754.11zf-A2013346.50E-12
Glyur000694s00023260.1PF01428.11zf-AN1971356.50E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control44.485
SRR1783600control44.264
SRR1783602moderate drought stress62.188
SRR1811619moderate drought stress58.498

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain149.425
DRR006520Root Summer glycyrrhizin high producing strain152.178
DRR006521Root Winter glycyrrhizin high producing strain258.044
DRR006522Root Winter glycyrrhizin high producing strain248.208
DRR006523Root Summer glycyrrhizin low producing strain274.516
DRR006524Root Summer glycyrrhizin low producing strain274.508
DRR006525Leaf Summer glycyrrhizin high producing strain102.934
DRR006526Leaf Summer glycyrrhizin high producing strain103.875

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)106.403
SRR2868004Drought Stress (root)140.688
SRR2967015Control (root)177.373

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf751.622
SRR9715740Leaf443.846
SRR9715741Leaf803.990
SRR9715739Root794.909
SRR9715742Root632.462
SRR9715743Root643.894

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h268.419
SRR8749028MeJA induced 9h349.818
SRR8749029MeJA induced 9h290.104
SRR8749030Uninduced146.850
SRR8749031Uninduced105.550
SRR8749032Uninduced367.644

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root170.017
SRR8400027Control - Root148.878

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved