Gene detail

Gene detail information of Glyur000694s00023253

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G44460.1	7.00E-52	Basic-leucine zipper (bZIP) transcription factor family protein
NR	XP_003596807.1	2.66E-137	Abscisic acid insensitive [Medicago truncatula]
Swissprot	tr\|Q8RYD6\|AI5L1_ARATH	1.00E-73	ABSCISIC ACID-INSENSITIVE 5-like protein 1
trEMBL	tr\|G7ITR9\|G7ITR9_MEDTR	1.00E-137	BZIP transcription factor {ECO:0000313\|EMBL:AES67058.1}

Sequence

Transcript Sequence

>Glyur000694s00023253.1
ATGGCTGGCCCAAAGCTTTTAGAGATAGTTTCTACGATAATGGTAGTTTCTGAGACAAAAACTGTTGCTTCCCAAAAATTAGCACCCACGGCTCTACAACAATCAGAGCAAGTAGTGCCATTGCATGAAGAACCAGAGCCTACATTTTCTCAAATGGGCAAACAGAACTCAATACTCTCACTTACCCTTGATGAGTTCCAAAGCAAGAGTGGAAAGAGCTTTGGGTCCATGAACATGGATGAATTCCTTGCCAGCATTTGGACCTCCAGTGACAATAACAACCAAATCAACCCACCACTACCTGCCCATGATATTGAAGTTTCTCAGGCTCAGAGAAAAAATGTTGCAACAGAACCCCACATTACCCAGAAGAAGGGCACATTCTCTGTCCCTCCTCCAATTNGCAAGAAAACTGTGGATGAAGTTTGGTCTGAGATCCATAAATGCCAACANCCACAACAGAATGAAGCTAATAATAATAACCTTGGAAGCAGAAATGAGACACTCAAGAAGAAACAAACACTTGGGGAAATGACTTTGGAGGATTTCCTAGTAAAAGCTGGGGTAGTACAAGAATCACCATTACCAATTAAGTCTTCAACNCAACCTATAACTTCAATGCCATTTCATAATCAGAGTGGCAATGCTGCAAGTAGTAACAGTAAACCATTGATCAATGCAAGTTATGGATTGAGGCCTGCAATGGGGATGGGATTTTCCACCCAAGGTAATATAGGGAACAATGTGTCTAGCAATGAGCTTGCAACATGCCAAATCTTGGCACAGAATAACAGCTTAGCTGCAAAGGATCGCTCCGCCGCGGAGAAAACTCAAAGCTTACCGGAGTCAAGTGGGTGTGGTAGCAATAGGAAGAGGATAATTGATGGTCCTCCTGAAGTGGTAATGGAGCGAAGGCAACGCAGAATGTTGAAAAATCGAGAATCAGCAGCGCGTTCTCGAGCAAGAAGACAGGCATATACGGTAGAGCTAGAAGCAGAGCTGAATCTGCTAAAAGAAGAGAATGAGAAGCTAAAACAAGTTCTGGCTGAAGCTGAGCAAAAGAGGAGACAAGAGATTTTCCAAAGAAAGCATTCAACAAAGGCTCAAAAAGGGGTAGAAAAACTGAGGGCAATAAGGAGGCCTATAAGCACAACTTGGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00694	72359	74744	-

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP
EAR motif-containing Proteins	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006355 regulation of transcription, DNA-templated

GO:0009737 response to abscisic acid

GO:0045893 positive regulation of transcription, DNA-templated

cellular_component
GO:0005634 nucleus

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000694s00023253.1	PF00170.16	bZIP_1	304	354	1.60E-09

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.219
SRR1783600	control	0.268
SRR1783602	moderate drought stress	0.275
SRR1811619	moderate drought stress	0.259

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.298
DRR006520	Root Summer glycyrrhizin high producing strain	2.031
DRR006521	Root Winter glycyrrhizin high producing strain	4.829
DRR006522	Root Winter glycyrrhizin high producing strain	4.635
DRR006523	Root Summer glycyrrhizin low producing strain	29.294
DRR006524	Root Summer glycyrrhizin low producing strain	28.570
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.079

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.008
SRR2868004	Drought Stress (root)	0.128
SRR2967015	Control (root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.999
SRR9715740	Leaf	1.208
SRR9715741	Leaf	1.132
SRR9715739	Root	2.922
SRR9715742	Root	16.388
SRR9715743	Root	14.307

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	276.787
SRR8749028	MeJA induced 9h	839.147
SRR8749029	MeJA induced 9h	1119.674
SRR8749030	Uninduced	343.872
SRR8749031	Uninduced	486.857
SRR8749032	Uninduced	449.432

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.562
SRR8400027	Control - Root	2.496