Gene detail

Gene detail information of Glyur000694s00023251

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G08320.3	1.00E-148	bZIP transcription factor family protein
NR	XP_003539469.1	0	PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like isoform X1 [Glycine max]
Swissprot	tr\|O24160\|TGA21_TOBAC	1.00E-123	TGACG-sequence-specific DNA-binding protein TGA-2.1
trEMBL	tr\|K7LVR2\|K7LVR2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G30990.5}

Sequence

Transcript Sequence

>Glyur000694s00023251.1
CCTTTGAAGCCCCACAAGTCCAAAGAGAGCCTGAGACAAAGTTTTTTTCGGGACACAATATCTTGGGTACCACAGAATGAGTTTCTTAATCCAAAATATTTTCAACTAGGGACAGTGTGATACAGACTAATCAATCAGGTTTCTTCATAGAGAAGGAGAAAAGGAGGAGATATAGACACCCCCCATGAAAGATAAAAAGTTGCAAAAAGAGGATCATATCTGAGAAAAAGACCTTACCAACTTACAACTTTAGATTAGATATTGCTTTGACAAGAAAGCTTTGATCTTTCCTCTGCTCTATGACCTTCTCCATATAGAATTCAATTTATTCCTAGAATTCCACACAATTGAGGTAAGGGAACATGAGAATGGACTAAAACAAGCCTTGCATGGCGAGTCACAGAATAGGAGAACTTGATTTGTCTGAGTCAGGGCCTTCAAGTCACCATGTCTCTTATGGAGTTCTTCACAATCACAGCATTAATACTCCTGTATCATCAAGCTTAATCAATCAAGGACCTGGTTTTAATTTTGGGGAGCTGGAAGAAGCAATTGTTCTGCAAGGAGTGAAGAGTAGAAATGATGATGGAGCCAAAGCATCTTTATTAATCACAGGCAGACCTGCAGCTACACTGGAAATGTTTCCTTCATGGCCAATGAGATTCCAGCAAATCCCAAGAGTAGTAGTAGGAGGTAACAAGTCAGGAGGGGAAAGCACAGATTCAGCTCTTTCAAGCAAAACGGAGAATCAGAACCCGTTTGAGCCAGAATCTCCCATAAGTAAAAAGGCATCTTCTTTGGATCATCATCAGGCTTTTTTTGATGAGGAACAGCATCATCTGCAGCTTCAACAGGAGATAATGGCAACTGATACCCCAAGAACAGCCTCTTCTTCACAGAATCCATCAGCAGCCAAATGGCCCAAATCACCTCACGAAAAGTTGCAGAGAAAGGGAGCTGGTTCTACATCAGATAAACCACTTGATGCAAAGACATTGAGACGATTAGCTCAAAACAGGGAGGCTGCAAGGAAAAGCCGCCTCAGAAAGAAGGCTTATGTGCAGCAGCTAGAGTCAAGTAGATTAAAGCTTACCCAATTGGAACAAGACCTTCAAAGAGCACGCTCTCAGGGAATGTTCATGGATTGGAGTAGTGGTGTTGGAGGCAACGTAAGCTCTGGAGGTGCAATGTTTGACATGGAATATGCAAGATGGTTAGAAGATGACAACCGGCTGTTGGCGGAGCTGCGGAACGGGTTGCAAGCGCCGTTATCAGATGGTGATATGAGAGTGATGGTGGATGGATATTTGTCTCATTATGATGAGTTCTTCAGGCTCAAGGGAGTTGCTGCTAAATCTGATGTGTTCCACCTCATCAATGGCATGTGGACTTCCCAAGCTGAACGCTGCTTCCTTTGGATTGGTGGTTTTAGGCCCTCCGAGATCATCACGATGTTGATACAACAATTGGAGCCACTAGCGGAGCAGCAGATANTGGGGATGTATGGGGTGAGNCATTCGTCACAGCAGGCAGAGGAGGCACTGTCTCAAGGGTTGGAGCAGTTGCAGCAGTCTCTGGTGGACACCATTGCCGGAGGACCCGTCGTTGATGGTGTTCAACAGATGGTTGTTGCCATGGGCAAGCTTGCCAATCTTGAAGGATTTGTTCGCCAGGCTGATAATTTGAGGCAACAGACTCTTCATCAATTATGCCGATTACTTACAGTTCGTCAAGCGGCACGGTGTTTTCTTGTGATTGGAGAGTACTACGGGCGTCTTCGTGCCCTTAGTTCTCTTTGGGCATCAAGACCACGAGAGACCTTGATCAGTGATGATAACTCATGCCAAACAACCACGGACATGCAAATGGTCCAACCTTCTCAGAATCATTTCTCCAGTTTCTGATAGATATATATATATATATAATTAAAAAAATCCATTAGCCTGAAAATTGCTGCTACAAGTGGATTTCGTTGGGCTGCTTTAGAATGAATGCCAGTGTCATCTAGAAAAAAAAATATTTTTTTTTTTGCCTTTTCAATCTTCTGCTCTCTTGTTGTGTCTTTATGTTTTATTAATGTAAATGTAAATCGAGTTTTATGTGAATCATGAGGAAGCTCCTACTTCAGTAAAGAGAAATAGAAAAATAGTTTATGAAAAGATGCATGTGAATATAGATAAAGAAGTATCATTAAAAATGATGATATCATTGGAGTGTTCTTTAGTGCAGAGGAGACAAATGAGAGAAAGGAGGTTATGGATTAAGAACATTGTCTCGTTGAGGTGGTGACTATTAAAATAAAATATGGTGCGTTTGATTGAAAATAAAATATGGTCCGTTTTAATTTGTTTGTTTGTGTTGAAAGTGGAGACATTGGACTGTAGACAAGTGCATGGGTGTCTCAGTCTCAGAATTGCATGTAACTGACGCTACAATGCAAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00694	60453	68967	+

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006351 transcription, DNA-templated

GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000694s00023251.1	PF00170.16	bZIP_1	200	241	6.40E-08
Glyur000694s00023251.1	PF14144.1	DOG1	281	358	2.80E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.125
SRR1783600	control	2.173
SRR1783602	moderate drought stress	2.469
SRR1811619	moderate drought stress	2.358

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.313
DRR006520	Root Summer glycyrrhizin high producing strain	9.150
DRR006521	Root Winter glycyrrhizin high producing strain	14.951
DRR006522	Root Winter glycyrrhizin high producing strain	14.271
DRR006523	Root Summer glycyrrhizin low producing strain	14.462
DRR006524	Root Summer glycyrrhizin low producing strain	14.722
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.190
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.189

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	35.971
SRR2868004	Drought Stress (root)	40.712
SRR2967015	Control (root)	40.325

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.218
SRR9715740	Leaf	0.117
SRR9715741	Leaf	0.240
SRR9715739	Root	1.484
SRR9715742	Root	5.266
SRR9715743	Root	4.384

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	16.979
SRR8749028	MeJA induced 9h	19.228
SRR8749029	MeJA induced 9h	7.561
SRR8749030	Uninduced	20.190
SRR8749031	Uninduced	11.411
SRR8749032	Uninduced	10.054

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.963
SRR8400027	Control - Root	13.729