Gene detail information of Glyur000693s00025752 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G03210.1 | 3.00E-112 | |
| NR | XP_003616173.1 | 0 | hypothetical protein MTR_5g076930 [Medicago truncatula] |
| trEMBL | tr|G7KFU4|G7KFU4_MEDTR | 0 | Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein {ECO:0000313|EMBL:AES99131.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00693 | 87470 | 88579 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000693s00025752.1 | PF13839.1 | PC-Esterase | 127 | 327 | 9.40E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.231 |
| SRR1783600 | control | 3.550 |
| SRR1783602 | moderate drought stress | 4.666 |
| SRR1811619 | moderate drought stress | 4.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.581 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.961 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.454 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.248 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.759 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.236 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.421 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.727 |
| SRR2868004 | Drought Stress (root) | 7.229 |
| SRR2967015 | Control (root) | 9.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.083 |
| SRR9715740 | Leaf | 1.985 |
| SRR9715741 | Leaf | 1.314 |
| SRR9715739 | Root | 9.560 |
| SRR9715742 | Root | 7.064 |
| SRR9715743 | Root | 7.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.094 |
| SRR8749028 | MeJA induced 9h | 4.198 |
| SRR8749029 | MeJA induced 9h | 2.884 |
| SRR8749030 | Uninduced | 2.545 |
| SRR8749031 | Uninduced | 0.523 |
| SRR8749032 | Uninduced | 0.588 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.252 |
| SRR8400027 | Control - Root | 11.783 |