Gene detail information of Glyur000693s00025744 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G37290.1 | 7.00E-81 | ARM repeat superfamily protein |
| NR | XP_004504996.1 | 5.39E-117 | PREDICTED: armadillo repeat-containing protein 7-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7KFV5|G7KFV5_MEDTR | 2.00E-114 | Uncharacterized protein {ECO:0000313|EMBL:AFK40260.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00693 | 50657 | 52287 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.109 |
| SRR1783600 | control | 2.142 |
| SRR1783602 | moderate drought stress | 2.457 |
| SRR1811619 | moderate drought stress | 2.494 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.930 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.979 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.203 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.151 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.951 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.959 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.883 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.779 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.485 |
| SRR2868004 | Drought Stress (root) | 2.717 |
| SRR2967015 | Control (root) | 2.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.750 |
| SRR9715740 | Leaf | 1.480 |
| SRR9715741 | Leaf | 1.575 |
| SRR9715739 | Root | 0.311 |
| SRR9715742 | Root | 1.148 |
| SRR9715743 | Root | 1.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.623 |
| SRR8749028 | MeJA induced 9h | 3.256 |
| SRR8749029 | MeJA induced 9h | 5.016 |
| SRR8749030 | Uninduced | 1.452 |
| SRR8749031 | Uninduced | 0.887 |
| SRR8749032 | Uninduced | 1.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.597 |
| SRR8400027 | Control - Root | 4.446 |