Gene detail information of Glyur000692s00016567 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10550.1 | 8.00E-112 | Subtilase family protein |
| NR | AET04097.2 | 0 | subtilisin-like serine protease [Medicago truncatula] |
| COG | YP_003380257.1 | 3.00E-54 | protease-associated PA domain-containing protein [Kribbella flavida DSM 17836] |
| Swissprot | tr|Q9MAP5|SBT33_ARATH | 1.00E-155 | Subtilisin-like protease SBT3.3 {ECO:0000303|PubMed:16193095} (Precursor) |
| trEMBL | tr|G7LH38|G7LH38_MEDTR | 0 | Subtilisin-like serine protease {ECO:0000313|EMBL:AET04097.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00692 | 125962 | 128523 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000692s00016567.1 | PF05922.11 | Inhibitor_I9 | 42 | 121 | 1.60E-17 |
| Glyur000692s00016567.1 | PF00082.17 | Peptidase_S8 | 152 | 493 | 2.20E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.020 |
| SRR1783600 | control | 9.177 |
| SRR1783602 | moderate drought stress | 6.481 |
| SRR1811619 | moderate drought stress | 6.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.051 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.929 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.078 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.178 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.483 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.802 |
| SRR2868004 | Drought Stress (root) | 9.841 |
| SRR2967015 | Control (root) | 12.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.275 |
| SRR9715740 | Leaf | 2.437 |
| SRR9715741 | Leaf | 5.233 |
| SRR9715739 | Root | 0.361 |
| SRR9715742 | Root | 5.531 |
| SRR9715743 | Root | 3.732 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.053 |
| SRR8400027 | Control - Root | 7.780 |