Gene detail

Gene detail information of Glyur000690s00025182

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G17220.1	5.00E-96	microtubule-associated proteins 70-5
NR	XP_006600289.1	0	PREDICTED: microtubule-associated protein 70-5-like [Glycine max]
Swissprot	tr\|Q8GYX3\|MP705_ARATH	1.00E-152	Microtubule-associated protein 70-5
trEMBL	tr\|K7MJB1\|K7MJB1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA17G01060.2}

Sequence

Transcript Sequence

>Glyur000690s00025182.1
AATATTTTGAAATACAACTCATGAAAAGTAAAATCATGAAAGAAAGTAACCGTAACAGTGAAGTGTATCAAGCAGAAGGATTAGCCGGCTTGTTATTCATTTCATTTCATCATTTGTCAAGTTTGCTTCACCAAAGGGGAAGATCATCTCATACCTCTCATTGCGGTCAATTCCTTATGTGCTAAACTAATGCACACTCTCATTTTCTGCCTTTTAACATCTTCCTAATCTAATAATTATTATTTATCATTTTTTTTTTTATATATGTTGCCCTGACCCTGAGAAGAGCCTCCATTTGTTGTTGGTGTTTTTGGACTCAAGACTATTTTGTCATTTAGTAGCACCTACAATGGAATCTGGAAACCAAACCAAAGCATTGTGCATATATAATAGTAAGCCAGTGAGTGCTCCCATTCGTCGTTGAACTTTGGTTATCTATCTCTGTGTGTTGTGTGCATTTGTTTCCCAGCGCCAAGGAGAGGGAAAGGGAAATGGTGAGCTGTGAAGAGCAACGTGGGGAGAAGCTTCCACTTGTCCACCCAGACCCTGTGGTGTTGGAGATTAACCNTTTGCAAAACCAACTCAAAGAAAAAGTTAAGCAGCTAGCGACTTGTCAGGGTGAAATCAAAACCTTGAGAGCAACTGAAGCTCTGAAGAATAAGGNCATAGAAGAGTTCAGAAATGAAGTCAGTAAACTGGACGAGAGACTTAGAGTCACGGAGGATCATCTTAAACAAAAGAATCTAGAAATCAAGAAACTGACAGATGAAAAGAAAGATACGCTGGCTGCACAATATGCGGCAGAAGCAACACTCAGAAGGATACATGCAAATCAAAAGGATGAAGATTCTGTTCCAATTGATAATGTCATTGCTCCTCTTGAAGCTGAGATTAAGATGTATAGGAATGAGATTACAGCACTTCAAGAAGATAAGAAAGCTATGGAACGACTCACAAAGTCAAAAGAGTCAGCATTGCTAGAAGCAGAGAGGATATTGCGAAATGCACTAGAGANGGCTCTAATAGTTGAAGAAGAGGAGAACAAAATCTTAGAGAAAACCCGCCGCCAGAAGATTCTGGAAGTTGAAAAGCTTAGCCAAACCATTCAAGAACTTGAGGAAGTCNTCTTAGCTAGCGGTGCCACTGCTAATGTTCTTCGCGATTATCAGAGACAGATTTCTGAATTGCAAGAGGAGAAAAGGACATTGGAAAGAGAGCTAGCAAGAGCAAAAGTCTCGGCCAATAGAATTGCAAATGTTGTGGCTAATGGGTGGAAGGATGAAAATGATAAGGTCATGCCTGTCAGGCAATGGCTGGAAGAGAGAAGGATTATGCAGGCAGAGTTGCAACGGTTGAAAGACAAGCTAGCTATATCAGAGAGAACAGCTAAGGCAGAGTCACAATTGAAGGATAAACTGAAGCTGAGGCTAAAAACACTGGAGGAAGGCTTAAAACATTTCTCAGAAAATATGTTGAAGAAAGGGATATGGNCATCAAGAAGTAAAGTTGCTGATAGTGGTGAAAAGGAAAATGAGATAATGGTGAACACAGACATGAATTTAAACCTGTTCAAGGATGAAAGAGAAGCAGCAGAAATTAAAACCACTGTTGATGTGGATGAAGACTTCGAAAGCAAGAAACCAAATGATTCAGGCAGTGACGATTTGGTGTCTGGTTTTCTATATGATAGGCTGCAAAAAGAGGTCACCAATTTGAGGAAGTATTGTGAAATTAAAGACGGTAGTTTGCAAGCTAAAGATGAAGAAATTAAGATGCTCATGAAGAAAGTTGATGCATTGACCAAGGCCATGGAAGTAGAGTGGAAGAAAATGAAAAGAGAAGCAGCTGCTAGAGAAAAGGAGGGTTCATCAACAAAGTCAGATGATAACAGGAAACACAGAAGCACAAACTCCTCCAAAAGGTTCTGTAACTTCATTTGTAGTGGGGCTGATTTTGTTCTTTTTGTCTTAACGCTATACCGTAACAATGTTTTAAAATTGCTGCAGGGCAATGAAAGACCGTTGAGGCTTCTTTATTTGGAGATAGTTAAATGCAGTTTATTTATCAGTGATATCTTGTGATTTTTCTTTGTAAATNCAAAACATTTGGTGAGGTTAGTATCTTGAAATAAATTTCCACTGGGGAAAGGGAGTTCCGGAATCTGATTCTGTACAGACAGAAGTACTCAANGTGTTCCTCTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00690	102635	106495	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007010 cytoskeleton organization

molecular_function
GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000690s00025182.1	PF07058.6	Myosin_HC-like	179	323	1.20E-70
Glyur000690s00025182.1	PF07058.6	Myosin_HC-like	326	457	1.80E-31
Glyur000690s00025182.2	PF07058.6	Myosin_HC-like	179	379	7.50E-78
Glyur000690s00025182.2	PF07058.6	Myosin_HC-like	401	535	7.80E-32

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.811
SRR1783600	control	0.814
SRR1783602	moderate drought stress	1.728
SRR1811619	moderate drought stress	1.791

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.146
DRR006520	Root Summer glycyrrhizin high producing strain	7.937
DRR006521	Root Winter glycyrrhizin high producing strain	0.091
DRR006522	Root Winter glycyrrhizin high producing strain	0.083
DRR006523	Root Summer glycyrrhizin low producing strain	10.352
DRR006524	Root Summer glycyrrhizin low producing strain	10.396
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.851
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.882

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.527
SRR2868004	Drought Stress (root)	15.659
SRR2967015	Control (root)	14.907

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.434
SRR9715740	Leaf	3.931
SRR9715741	Leaf	4.325
SRR9715739	Root	0.075
SRR9715742	Root	3.485
SRR9715743	Root	2.722

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.568
SRR8749028	MeJA induced 9h	4.516
SRR8749029	MeJA induced 9h	4.453
SRR8749030	Uninduced	2.425
SRR8749031	Uninduced	2.295
SRR8749032	Uninduced	2.827

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.822
SRR8400027	Control - Root	2.950