Gene detail information of Glyur000690s00025181 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G16400.1 | 5.00E-14 | |
| NR | XP_007154038.1 | 4.24E-42 | hypothetical protein PHAVU_003G085900g [Phaseolus vulgaris] |
| trEMBL | tr|V7C770|V7C770_PHAVU | 2.00E-42 | Uncharacterized protein {ECO:0000313|EMBL:ESW26032.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00690 | 97148 | 97438 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.472 |
| SRR1783600 | control | 21.705 |
| SRR1783602 | moderate drought stress | 20.823 |
| SRR1811619 | moderate drought stress | 21.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.293 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.547 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.236 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.101 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 64.256 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 63.364 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.260 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.805 |
| SRR2868004 | Drought Stress (root) | 9.904 |
| SRR2967015 | Control (root) | 13.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.324 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.208 |
| SRR9715739 | Root | 5.290 |
| SRR9715742 | Root | 4.738 |
| SRR9715743 | Root | 4.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.708 |
| SRR8749028 | MeJA induced 9h | 3.028 |
| SRR8749029 | MeJA induced 9h | 3.616 |
| SRR8749030 | Uninduced | 0.404 |
| SRR8749031 | Uninduced | 1.813 |
| SRR8749032 | Uninduced | 9.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.062 |
| SRR8400027 | Control - Root | 11.537 |