Gene detail information of Glyur000690s00025177 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13130.1 | 8.00E-06 | |
| NR | XP_007147627.1 | 1.03E-59 | hypothetical protein PHAVU_006G140600g [Phaseolus vulgaris] |
| trEMBL | tr|V7BSS4|V7BSS4_PHAVU | 4.00E-60 | Uncharacterized protein {ECO:0000313|EMBL:ESW19621.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00690 | 86614 | 87327 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000690s00025177.1 | PF05553.6 | DUF761 | 209 | 232 | 0.00058 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.565 |
| SRR1783600 | control | 0.556 |
| SRR1783602 | moderate drought stress | 2.699 |
| SRR1811619 | moderate drought stress | 2.853 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.304 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.301 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.304 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.224 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.433 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.231 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 175.684 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 177.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 61.628 |
| SRR9715740 | Leaf | 101.580 |
| SRR9715741 | Leaf | 68.601 |
| SRR9715739 | Root | 0.404 |
| SRR9715742 | Root | 0.087 |
| SRR9715743 | Root | 0.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.278 |
| SRR8400027 | Control - Root | 1.891 |