Gene detail

Gene detail information of Glyur000690s00025174.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G26310.1	5.00E-86	cytochrome P450, family 71, subfamily B, polypeptide 35
NR	XP_003610580.1	0	Cytochrome P450 [Medicago truncatula]
COG	YP_007066645.1	2.00E-23	monooxygenase [Calothrix sp. PCC 7507]
Swissprot	tr\|O81974\|C71D8_SOYBN	0	Cytochrome P450 71D8
trEMBL	tr\|G7JMV4\|G7JMV4_MEDTR	0	Cytochrome P450 family 71 protein {ECO:0000313\|EMBL:AES92777.1}

Sequence

Transcript Sequence

>Glyur000690s00025174.1
CACGAGTTTCAAACGGCTAAGTTCCCAAGTCTTTCACTCTATGCCATGGAATTCCAATTATCTTCCTCCGTGGTCAATGCCTCNTTCCTCTTTTTGCTGCTTTGTCTAGCAAAGATTTACAAGCAGAAAATCAAAGCGAGGAGTACTGCGGTTCATAAACTTCTACCCCCTGGGCCATGGAAGCTGCCTNTAATAGGGAACCTGCATCAACTGGCAGTGGCAGGATCACTCCCTCACCACACTCTTCGAGATCTATCCCACAAACATGGACCTCTCATGCATCTTCAACTGGGTGAAATCTCCGCAGTGGTAGTTTCTTCCCCTGATATGGCCAAGAAGTTAATGAAGACACACGATCTCTCTTTTGTGCNGAGGCCAGAGCTACTCTGTCCTAAAATATTGGCATATGGATCAACAGATATTGCATTTGCTCCATACGGTGATTACTGGAGACAGATGAGGAAAATATGCACATTGGAGCTTCTCAGTGCCAAAAGGGTTCAATCTTTCTCCTTCATCAGAGAAGATGAGGTGGCAAAGCTCATTCAATCCATTCAGTTGTTCTCTGCCTCTGAAGGCTCTGTACCGGTCAATNTCACTAAAATGGTTCTCTCTTTGGTAATTACCCTTGTTTCGAGGGCAGCATTTGGTAAAAAATCTGAATATGAAGAGGAGCTTTTGTCTTTGCTCAAGAAAGGAGTTGAAATGACGGGAGGATTTGACGTTGCTGATTTGTTCCCTTCNCTGAAACCGATCCATCTCATAACTCGGATGAAGGCTAAATTGGAGAACATGCAAAAGAAGCTGGACAGGATCTTAGAAAACATTGTCAACGAGCATCGATCAAATTACCATGGCAACAAAGGTGAAAATCTCGTTGATGTTCTCTTGCGCGTTCAACAGAGTGGTGATCTNGAGATCCCAATCACAGACAACAACATCAAAGCCGTGATATGGAAAAGAACCATAGAAATAAGAGAAGTTTTTAGGGGAAAGAAGACAATTTATGAGACTGGTCTAAATGAACTCGGTTACTTGAAGTCAGTGATCAAGGAAACCATGCGGTTACACCCACCGGTTCCCTTGTTGCTCCCAAGAGAATGCAGGGAACAGTGCAAGATAGGTGGGTATGAAATACCTGTGAAGACTAAAGTGATAGTGAATGCATGGGCACTCGGGAGAGATCCCAAGCATTGGTATGATGCGGACAAGTTTATACCTGAGAGGTTTCATCATGACACTAGTTTTGATTTTAAAGGGAATAACTTTGAGTATATCCCATTTGGGGCAGGAAGGAGAATTTGTCCTGGTATTTCACTTGGCTTGGCTAATATTGAGCTTCCTCTGGCAGCATTGCTCTACCACTTTGACTGGGAACTTCCCAATGGAGTGAAACCTGAGGATTTGGATATGACTGAAGCTTTTGGATCTGCGGTGGCAAGGAGAAACGACCTGTATTTGATTCCAACTCCATGTAAGTTATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00690	73773	75397	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B35

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000690s00025174.1	PF00067.17	p450	56	318	2.70E-28
Glyur000690s00025174.1	PF00067.17	p450	324	475	4.20E-48

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.270
SRR1783600	control	0.223
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.008

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.175
DRR006520	Root Summer glycyrrhizin high producing strain	1.218
DRR006521	Root Winter glycyrrhizin high producing strain	0.187
DRR006522	Root Winter glycyrrhizin high producing strain	0.183
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.372
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.375

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.937
SRR2868004	Drought Stress (root)	0.402
SRR2967015	Control (root)	0.401

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.180
SRR9715740	Leaf	2.010
SRR9715741	Leaf	0.114
SRR9715739	Root	1.380
SRR9715742	Root	0.935
SRR9715743	Root	0.872

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.028
SRR8749029	MeJA induced 9h	0.020
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.052
SRR8400027	Control - Root	1.081