Gene detail

Gene detail information of Glyur000690s00025163

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G47540.1	5.00E-160	Mo25 family protein
NR	XP_003610564.1	0	Mo25 family protein [Medicago truncatula]
Swissprot	tr\|Q9FGK3\|MO25N_ARATH	0	Putative MO25-like protein At5g47540
trEMBL	tr\|G7JLQ8\|G7JLQ8_MEDTR	0	Calcium-binding protein {ECO:0000313\|EMBL:AES92761.2}

Sequence

Transcript Sequence

>Glyur000690s00025163.1
TTTTTTATTGAAAAATTGTTTGTAGAAATCGTCAGGGCCGAAAGAGAAACGTAACGAAACGACACGTGTCGAGGACAAAAAGGGAAAACGNAGAAGAAGTTGAAAGGTAGATTAATTTAGTTTGTCCATATCTGGTTCTGAAGCAGGATAGTTGCCTGGGACATACATAGATAAATGATGACGAAGAACCGGGAAGAAAAAATGAGAAGGTGATAGATAGGAACAAGGAGTAGGAGGGTGAGGAGAAGGTGAATCTCGATCTGAATCAGAAACCCTAACAAGTAAATGAATTCAGAGTAAGTGCGGGAAGGGGAAAATAGGTTTGTGCGCGACGAAACCTAAGGGGCCTCGAAGAGGCTCTTCGTCGGAGGTGGTGGTTTATTCGGAGCCTCCACCACCTCCGGAATCGCCGAAGATGAAGAGCCTCTTCAAGTCCAAGCCCCGCACTCCCTCCGACATTGTTCGCCACACCAGAGATCTTCTCCGCCTCCTCCAACAACCTCCCGACACCAAGCGCGATAATGACAAGCAGATGCCCGAGTTGTATAAAAATATCAGGGAGCTAAAGACAATCCTTTATGGAGACAGTGAATCCGAACCGGTCCCCGAAGCTTGTGCGCAGTTNACTCAGGAGTTCTTTAAGGATAACACTTTTCGACTCATTGTTGAATGTCTTCCAAAACTGAACTTGGAGGCTAGAAAAGATGCCACTCANGTTGTTGCAAATTTACAGAGGCAACCGGTTCAGTCTAGGCTGATTGCGTCTGATTACCTGGAGAAAAATATGGATCTTATGGATATTTTGATATCTGGCTATGAAAACACAGAAATGGCTTTGCATTATGGTGCAATGTTGAGGGAGTGCATAAGACACCAGATTGTTGCCAAATATGTTCTGGAATCGCCTCATATGAAGAAGTTTTTTGACTACATTCAGCTTCCAAGTTTTGACATAGCTGCAGATGTCGCAGCAACTTTTAAGGAACTCATGACAAGACATAAATCTACTGTAGCTGAATTCCTTTCTAAGAATTATGAATGGTTTTTTGATGAATATAACTCTAAGTTGTTGGAATCGTCCAATTACATTACAAGGCGTCAAGCTGTCAAGTTGTTGGGAGATATGTTACTTGACCGCTCAAATTCAGCTGTAATGACNCGATATGTCAGCTCAAGAGACAACTTAAGGATTTTAATGAATCTTATGAGGGAGTCTAGCAAGAGCATACAGATAGAAGCATTTCATGTTTTCAAGCTATTTGCTGCTAACCAAAATAAACCAGCCGATATCGTCGGCATACTTGTTACAAACAGAAGCAAGCTTCTGAGACTATTGGGTGACTTAAAAATCGATAAAGAGGATGAACAGTTTGAAGCTGACAAAGCTCAAGTCATGAAGGAAATTGCTGCTCTTGAACCTAGGGACCGTCCTTGAGCTTCNGATTGTGTCGAGTAGCAAGTTGCATTGCGGCATTTCATTTCATTTAATTGTCTGTTGTTATGGTTCTTTTAGTCTTCATTAAGTTGAGACTAGCATTTCACACAAATTCAATGTTTCCATTGCATAATTTATTTCGGTTCTGTAAATTTAGTAGACAAATAAATTGCTAAAATGAGATGCATNCAGTAGCAGCATATGGCTTTTCTGGTGTTCAGAAAGGTTTGCCTAGCAACCCAGTAGTTTATAAATTGGACGGGGTCATGCAATATTTGACCATCTACAAATTGTACGATTAATTTATTGCGTTCCCTTTTGAATGGTGGCCTTCTGCAGTGCAACTTGTTTACTGTAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00690	9291	13718	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005488 binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000690s00025163.1	PF08569.6	Mo25	1	335	3.40E-115

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	39.184
SRR1783600	control	39.348
SRR1783602	moderate drought stress	37.264
SRR1811619	moderate drought stress	36.644

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	33.743
DRR006520	Root Summer glycyrrhizin high producing strain	33.097
DRR006521	Root Winter glycyrrhizin high producing strain	46.374
DRR006522	Root Winter glycyrrhizin high producing strain	45.042
DRR006523	Root Summer glycyrrhizin low producing strain	32.086
DRR006524	Root Summer glycyrrhizin low producing strain	31.846
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.794
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.487

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	72.299
SRR2868004	Drought Stress (root)	73.020
SRR2967015	Control (root)	60.200

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	47.720
SRR9715740	Leaf	36.925
SRR9715741	Leaf	48.515
SRR9715739	Root	17.769
SRR9715742	Root	31.939
SRR9715743	Root	33.232

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	26.524
SRR8749028	MeJA induced 9h	26.603
SRR8749029	MeJA induced 9h	17.923
SRR8749030	Uninduced	26.504
SRR8749031	Uninduced	25.532
SRR8749032	Uninduced	20.514

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	99.175
SRR8400027	Control - Root	106.021