Gene detail information of Glyur000690s00025162 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47550.1 | 2.00E-26 | Cystatin/monellin superfamily protein |
| NR | XP_007154019.1 | 8.94E-53 | hypothetical protein PHAVU_003G084300g [Phaseolus vulgaris] |
| Swissprot | tr|Q41916|CYT5_ARATH | 1.00E-32 | Cysteine proteinase inhibitor 5 (Precursor) |
| trEMBL | tr|V7C9I3|V7C9I3_PHAVU | 3.00E-53 | Uncharacterized protein {ECO:0000313|EMBL:ESW26013.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00690 | 4269 | 6804 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000690s00025162.1 | PF00031.16 | Cystatin | 35 | 109 | 5.40E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 269.429 |
| SRR1783600 | control | 275.402 |
| SRR1783602 | moderate drought stress | 409.178 |
| SRR1811619 | moderate drought stress | 432.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 266.724 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 259.787 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 142.404 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 142.590 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 179.620 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 187.310 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 58.101 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 55.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 90.395 |
| SRR2868004 | Drought Stress (root) | 66.974 |
| SRR2967015 | Control (root) | 80.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 265.112 |
| SRR9715740 | Leaf | 59.109 |
| SRR9715741 | Leaf | 351.223 |
| SRR9715739 | Root | 915.770 |
| SRR9715742 | Root | 716.718 |
| SRR9715743 | Root | 706.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 112.303 |
| SRR8749028 | MeJA induced 9h | 76.873 |
| SRR8749029 | MeJA induced 9h | 178.430 |
| SRR8749030 | Uninduced | 30.427 |
| SRR8749031 | Uninduced | 35.471 |
| SRR8749032 | Uninduced | 188.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2292.794 |
| SRR8400027 | Control - Root | 2153.175 |