Gene detail information of Glyur000689s00031835 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G51130.1 | 7.00E-08 | |
| NR | XP_002531505.1 | 2.27E-11 | conserved hypothetical protein [Ricinus communis] |
| Swissprot | tr|Q9SD33|U183_ARATH | 4.00E-09 | UPF0183 protein At3g51130 |
| trEMBL | tr|B9SZT6|B9SZT6_RICCO | 8.00E-12 | Putative uncharacterized protein {ECO:0000313|EMBL:EEF30859.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00689 | 121846 | 123377 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.376 |
| SRR1783600 | control | 0.993 |
| SRR1783602 | moderate drought stress | 0.374 |
| SRR1811619 | moderate drought stress | 0.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.559 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.277 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.392 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.828 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.204 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.353 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.245 |
| SRR2868004 | Drought Stress (root) | 0.831 |
| SRR2967015 | Control (root) | 1.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.294 |
| SRR9715740 | Leaf | 0.394 |
| SRR9715741 | Leaf | 0.490 |
| SRR9715739 | Root | 0.035 |
| SRR9715742 | Root | 0.145 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.090 |
| SRR8749028 | MeJA induced 9h | 2.463 |
| SRR8749029 | MeJA induced 9h | 1.157 |
| SRR8749030 | Uninduced | 2.206 |
| SRR8749031 | Uninduced | 0.486 |
| SRR8749032 | Uninduced | 1.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.416 |
| SRR8400027 | Control - Root | 1.334 |