Gene detail information of Glyur000689s00031833 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G20990.1 | 9.00E-75 | Cysteine/Histidine-rich C1 domain family protein |
| NR | XP_003589678.1 | 1.21E-175 | hypothetical protein MTR_1g034960 [Medicago truncatula] |
| trEMBL | tr|G7IA18|G7IA18_MEDTR | 5.00E-176 | Cysteine/histidine-rich C1 domain protein {ECO:0000313|EMBL:AES59929.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00689 | 83102 | 86375 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000689s00031833.1 | PF07649.7 | C1_3 | 221 | 248 | 9.40E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.520 |
| SRR1783600 | control | 5.710 |
| SRR1783602 | moderate drought stress | 3.006 |
| SRR1811619 | moderate drought stress | 3.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.910 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.417 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.708 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.688 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.346 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.376 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.587 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.905 |
| SRR2868004 | Drought Stress (root) | 26.582 |
| SRR2967015 | Control (root) | 17.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.206 |
| SRR9715740 | Leaf | 1.578 |
| SRR9715741 | Leaf | 4.311 |
| SRR9715739 | Root | 1.861 |
| SRR9715742 | Root | 17.214 |
| SRR9715743 | Root | 14.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.256 |
| SRR8400027 | Control - Root | 6.957 |