Gene detail

Gene detail information of Glyur000689s00031829.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G20980.1	squamosa promoter binding protein-like 14
NR	XP_004498230.1	PREDICTED: uncharacterized protein LOC101506418 [Cicer arietinum]
Swissprot	tr\|Q8RY95\|SPL14_ARATH	Squamosa promoter-binding-like protein 14
trEMBL	tr\|G7IA23\|G7IA23_MEDTR	Squamosa promoter-binding-like protein {ECO:0000313\|EMBL:AES59934.1}

Sequence

Transcript Sequence

>Glyur000689s00031829.1
ATGGAAAAGGTGGCTTCTCTTCCTCCTCCTCCTCCCATGTTGGTGCATCCATTCTACGACTCGCCTTCGTTGACGGCGAATACAAAGAAGCGCGATCTGCCGTACGACGTCGTTCGGGTGTCTCCAAACGAGAATTGGAACCCTAAGGAATGGAACTGGGACAGCGTGAGGTTCGTGGCGAAACCATCGAACAACAACAACAGAGTCTCAGAAGAAGACGAGACTCTAAAATTGAATCTCGGTGGTGGTGGTGCGAATAGTAATATTAATAATAATAATAATAGGGGGAACAAGAGGGTGCGTTCGGGTTCCCCATCTGGAACGGCGTCGTATCCGATGTGTCAAGTGGATAACTGCAAGGAAGATCTATCGAAGGCGAAGGACTATCACCGAAGGCACAAGGTGTGTGAGGCTCATAGTAAGGCTTCTAAGGCGCTACTTGCTAACCAAATGCAAAGGTTCTGTCAACAGTGTAGTAGGTTTCACCCTTTGTCGGAGTTTGACGAGGGGAAGCGAAGCTGTCGACGGAGACTCGCCGGACANAACCGTCGCCGGAGAAAGACGCAGCCCGAAGACGTTACATCGCCACCGACGACCACCAACCCCGCCGCCGCCAATTTGGAAATCTTNAACTTGTTGACTGCAATAGCCGGAGGCTCGCAAGGAAAATTTGAGGAAAGAAGGTCACAAGTTCCAGATAAAGAGCAGCTTGTTCAGATTCTGAATAGGATCCCTTTGCCTGCTGATCTTACAGCGAAGTTGCTGGATGCTGGTAATAATCTCAATGGGAAAAATGATCATGTGCAAATGCAAACTTCACCCTCCTATGATCATCAACATGACCAACCGAACCACGCCCCCACAACTATGGACTTACTTGCTGTTCTTTCCACCACTCCAACTCCATCCACATCTGCTCCCAATGCCAATGCATTACTCTCTCAAAACAACGGCGGTGGTGGCGGTGACAAGTCTAGGACTAGTGCTGATCAGATGAGAGAACAACAATTCACTTCAGTTGGTGGAGAAAGAAGCAGTGGCAGTTCCGAGTCTCCGGTTGAAGATTCAGATTGCCAGGAGGATGTTCGAGTTAATTTGCCATTGCAACTTTTTAGCTCCTCTCCAGAAGATGATAGCCTGCCGAAAATGGCATCTTCACGAAAGTATTTCTCTTCGGACAGTAGTAACCCTGTGGAAGAGAGGTCACCATCGTCATCTCCTCCTGTTATGGAGATGCAGTTTGGTTTGCAGGGCAGGGATAGATGTCTCAAGCCAAAGANCATTTCCACTGGATTAGGAGTCAATGCAAATAAGGAAGCTAGCCAAAGTCAAAGTTGTAATATCTCTCTGGATCTCTTTAAAGGATCAAAATCAAATAACAGGATCCAACCATCCAGTTCAGTTCAAAGTGTTCCATTTCAAGCTGGTTATACATCTTCAGGCTCTGATCATTCGCCTCCCAGTTTGAATTCAGATTCCCNGGTAGATCGTACTGGGAGAATAATGTTTAAATTATTTGACAAGCATCCTAGCCATTTCCCAGGAACATTGCGAACACAGATTTACAATTGGCTTTCTAATCGACCAATAGACTTGGAGAGCTACATAAGGCCTGGCTGTGTGGTTTTATCAATTTATGCTACAATGTCTTGTGCTGCCTGGGAGCAACTTGAAGAAAACTTTCTCCAACGNGTTCAATCTTTAATTCAAAATTCAGATTCTGATTTTTGGAGAAATGGAAGATTTATTGTTCATTCTGGCAGACAGTTAGCATCACACAAAGATGGAAAGATACGCATGTGCAAACCATGGAGGACATGGAGGTCTCCAGAGTTGATATCTGTGTCCCCTTTGGCAATTGTTGGTGGACAAGAAGCCTCTATTTCNTTGAAGGGCAGAAACCTGTCAACTCCTGGCACAAAGATTCACTGCACAGATACTGGCTGTTACACATCTGCAGAAGTTACAGGATCTGCATATCCTGGTATGGCCCATGATGAGATAAAATTGGGCAGTTTTAAAGTTNAGAATGCATCTCCTGGTGTTCTGGGCCGCTGTTTCATTGAGGTTGAAAATGGTTTCAAGGGGAGCAGTTTTCCACTGATAATAGCTGATGCAACCATTTGCAAAGAACTGAGACCACTTGAGTCTGAATTTGATGAGGAGGAAAAAATATGTGATGCCATTTCAGAGGAGCATGAATATCATTTTGGGAGGCCCNGGTCAAGGGAGGTGGCTTTACACTTTCTGAATGAGCTTGGCTGGCTGTTTCAAAGAGAACGGTTCTCATATATGCATGAGGTTCCAGATTATTCACTTGACAGGTTCAAATTTGTACTCACGTTTGCTGTGGAAAGAAACTGTTGCATGTTAGTCAAAACCCTTCTGAATATGCTGGTNGATAAACAATTGGAAGAGGAAGGGTTGTCAACAGGGTCAATGGAGATGCTGAATGCAATTCAACTCTTGAATAGAGCTGTGAAAAGAAAGTACATAAGCATGGTTGATTTTCTCATCCACTATTCTATACCTAGCAAAAATGATATATCCAGGAAATATGTATTTCCACCAAATCTTGAGGGCCCTGGTGGTATTACACCCTTGCACTTGGCAGCATGTACATCGGGTTCTGAGGGTTTAATTGACTCTTTAACAAATGATCCACAGGAGATTGGGTTGAAGTGCTGGGATACCCTTGTTGATGCAAATGGGCAGACTCCGCATGCATATGCCATGATGAGAAATAATCACTCTTATAATGTGCTGGTTGCCCGTAAACTTGCTGATCAACAAAGGGGTGAAGTTTCAGTTAGAATTGACAATGAGATAGAGCACCAGTCACTGAGAGTTGAGCTTACTCAAAAGCTGAGTAACCAAGTCAAACGGGGTGAAAATTCTTGTGCCAAGTGTGCAATGGCAGAAATCAAGTACAACAGAAGATTTTCAGTTTCACAGGGCTTACTTCACCGCCCCTTTATTCATTCGATGCTAGCTGTTGCTGCTGTTTGTGTATGTGTTTGTGTGTTCTTCCGTGGAACCCCTTCTGTAGGCTCAGTTGCTCCCTTCAGGTGGGAAAATTTGGATTTCGGCACAATGTAATTCTATTGGTAAATGAAATTGAGATAAAGGTAATGGAAGGCATCAGCCAGGGGGGAAACCCAATTACTGCTTCTGTGGGAAAGTGGGGCATTTTGTGATGAGAGCCCAATGTGAACATATATGTTTGACACAGCTGTATTTGGCGGATCCAGGAGAAGCTGTGGAAAGTAGAGATGGCTCGTGTACAGATTCTGACTTAAAATGCTTCATATTCTCTGTGATGCCTGACAGCCTGAGTTAAAGATAAAGTTATACATGAATGTTTAATCTGTTCGGTGTTGGAATTTCAGAATTGAAGAAGCCTTCAACTCTTTAGAGCAGATAAAACATGTTAGAATGGTGAAAGTCTGGTCTCAAGCACAAAACAATTATGAGAGCAGTAAGCATTCGGAATAAAGAGAATTATGGTGAGTAAAATGTTGGTTATTGTTGGTGCGGTCAATACTTGGGTTCGTTGCCGCTTTTCTTCACGAAGGTCAATCAGGACAAATTACCTGTTTTGTTTTTCCCTATATTTGTTTTATTATTATNAGTTGAAGTTACGAGACCAAGGTGCTCTGATGCATAGATTTCA

Protein Sequence

>Glyur000689s00031829.1
MEKVASLPPPPPMLVHPFYDSPSLTANTKKRDLPYDVVRVSPNENWNPKEWNWDSVRFVAKPSNNNNRVSEEDETLKLNLGGGGANSNINNNNNRGNKRVRSGSPSGTASYPMCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLANQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGXNRRRRKTQPEDVTSPPTTTNPAAANLEIXNLLTAIAGGSQGKFEERRSQVPDKEQLVQILNRIPLPADLTAKLLDAGNNLNGKNDHVQMQTSPSYDHQHDQPNHAPTTMDLLAVLSTTPTPSTSAPNANALLSQNNGGGGGDKSRTSADQMREQQFTSVGGERSSGSSESPVEDSDCQEDVRVNLPLQLFSSSPEDDSLPKMASSRKYFSSDSSNPVEERSPSSSPPVMEMQFGLQGRDRCLKPKXISTGLGVNANKEASQSQSCNISLDLFKGSKSNNRIQPSSSVQSVPFQAGYTSSGSDHSPPSLNSDSXVDRTGRIMFKLFDKHPSHFPGTLRTQIYNWLSNRPIDLESYIRPGCVVLSIYATMSCAAWEQLEENFLQRVQSLIQNSDSDFWRNGRFIVHSGRQLASHKDGKIRMCKPWRTWRSPELISVSPLAIVGGQEASISLKGRNLSTPGTKIHCTDTGCYTSAEVTGSAYPGMAHDEIKLGSFKVXNASPGVLGRCFIEVENGFKGSSFPLIIADATICKELRPLESEFDEEEKICDAISEEHEYHFGRPXSREVALHFLNELGWLFQRERFSYMHEVPDYSLDRFKFVLTFAVERNCCMLVKTLLNMLVDKQLEEEGLSTGSMEMLNAIQLLNRAVKRKYISMVDFLIHYSIPSKNDISRKYVFPPNLEGPGGITPLHLAACTSGSEGLIDSLTNDPQEIGLKCWDTLVDANGQTPHAYAMMRNNHSYNVLVARKLADQQRGEVSVRIDNEIEHQSLRVELTQKLSNQVKRGENSCAKCAMAEIKYNRRFSVSQGLLHRPFIHSMLAVAAVCVCVCVFFRGTPSVGSVAPFRWENLDFGTM

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00689	18033	25708	+

Gene family

Gene family	subfamily
Transcription Factors Family	SBP
EAR motif-containing Proteins	SBP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0005634 nucleus

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000689s00031829.1	PF03110.9	SBP	113	190	6.90E-37

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	19.983
SRR1783600	control	20.229
SRR1783602	moderate drought stress	22.625
SRR1811619	moderate drought stress	22.570

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	22.128
DRR006520	Root Summer glycyrrhizin high producing strain	22.143
DRR006521	Root Winter glycyrrhizin high producing strain	37.660
DRR006522	Root Winter glycyrrhizin high producing strain	36.198
DRR006523	Root Summer glycyrrhizin low producing strain	37.491
DRR006524	Root Summer glycyrrhizin low producing strain	37.553
DRR006525	Leaf Summer glycyrrhizin high producing strain	16.763
DRR006526	Leaf Summer glycyrrhizin high producing strain	16.553

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	45.945
SRR2868004	Drought Stress (root)	57.358
SRR2967015	Control (root)	58.492

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	25.990
SRR9715740	Leaf	25.564
SRR9715741	Leaf	34.386
SRR9715739	Root	10.380
SRR9715742	Root	35.834
SRR9715743	Root	30.679

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	19.654
SRR8749028	MeJA induced 9h	26.655
SRR8749029	MeJA induced 9h	20.398
SRR8749030	Uninduced	37.913
SRR8749031	Uninduced	31.201
SRR8749032	Uninduced	27.312

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	43.215
SRR8400027	Control - Root	40.245