Gene detail information of Glyur000689s00031826 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G20970.1 | 5.00E-89 | |
| NR | XP_003530323.1 | 0 | PREDICTED: microtubule-associated protein futsch-like [Glycine max] |
| Swissprot | tr|O23144|PPI1_ARATH | 2.00E-30 | Proton pump-interactor 1 |
| trEMBL | tr|I1KKN0|I1KKN0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G19850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00689 | 341 | 6528 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 72.079 |
| SRR1783600 | control | 71.536 |
| SRR1783602 | moderate drought stress | 75.605 |
| SRR1811619 | moderate drought stress | 75.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.360 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.668 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 35.582 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 34.775 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.234 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 40.753 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.019 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 62.431 |
| SRR2868004 | Drought Stress (root) | 46.491 |
| SRR2967015 | Control (root) | 53.305 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.261 |
| SRR9715740 | Leaf | 10.308 |
| SRR9715741 | Leaf | 11.787 |
| SRR9715739 | Root | 5.730 |
| SRR9715742 | Root | 44.149 |
| SRR9715743 | Root | 38.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.081 |
| SRR8749028 | MeJA induced 9h | 48.243 |
| SRR8749029 | MeJA induced 9h | 31.975 |
| SRR8749030 | Uninduced | 44.815 |
| SRR8749031 | Uninduced | 27.288 |
| SRR8749032 | Uninduced | 19.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 67.246 |
| SRR8400027 | Control - Root | 80.185 |