Gene detail

Gene detail information of Glyur000687s00031813

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G50180.1	2.00E-152	NB-ARC domain-containing disease resistance protein
NR	KEH21734.1	0	disease resistance protein (CC-NBS-LRR class) family protein [Medicago truncatula]
COG	YP_002463148.1	2.00E-12	NB-ARC domain-containing protein [Chloroflexus aggregans DSM 9485]
Swissprot	tr\|Q9SX38\|DRL4_ARATH	0	Putative disease resistance protein At1g50180
trEMBL	tr\|A0A072TW48\|A0A072TW48_MEDTR	0	Disease resistance protein (CC-NBS-LRR class) family protein {ECO:0000313\|EMBL:KEH21734.1}

Sequence

Transcript Sequence

>Glyur000687s00031813.1
TCAAAATCATTTATTCTGCAAAATTCTTATGACAATTCAATTAATTGTTGCGGTTTAATGCTTAGCTGATGAGAAGTTTTCTGCAGGTTGACTCATCATTTTGTTGCGGAAGGTGACAGAATAATCATCATGGTTGAGTCAGTTGTGTCCTTTGCAGTTGAAAGGCTTGGCGACTTAGTAATTGAAGAGGCCAGCTTGTTACATGGGGTGANTAAGCAAGTAAAAAATTTGCAATCTGAACTCAAGATTATGCAATGCTTCCTAAGAGACGCTGAGAGAAGACGGGATGAAGGTGAGACTATAAAGAACTTGATATCAGATATCAGAAAAGTAGCTTATGATTCTGAGGATGTGATTGAAATTTATGCCATCAAAGTTGCGCGTGCAACAACTCCTTTCTACAAAGTAAAACAACTTCACAGAGTGGGATCTAAGATTACATCTATTAATTCTCGAATATCTGTCCTCACCAGAAGATTAAAAACTTATGGTTTGGTTGCAACAATAGACATTGAAGATTCACGCTTTCTGTTTGAGGCACAAAGACAATTGAGGTGGTCTTATTCTCATGTTGTTGAAGAGTTCACTGTAGGCTTGGATGAGGACATAGAGCAAGTGGTGAAATGGCTACTGAATCCAAATCAGCATTGTGGAGTGGTTTATATTTGTGGAATGGGTGGTCTGGGTAAAACGACACTGGCTAAAAGTGTTTATCATTGCAATGCTATTAGGCGCCANTTTGAGGGTTTTGCTTGGGCCTATATATCTCAGCAATGCAAGAAAAGAGATGTTTGGGAGGGGATTTTACTGAAGCTTACTTCCCCTTCCAGAGAAGAGAGGGATGAGATTAGGAACATGAGAGATGAAGAACTGGCAAAAAAGTTGTATAAAGTTCAGCAAGAGAAAAAATGTTTGATCATCTTGGATGACATATGGAGCAATGAAGCATGGGATACTCTAAGCCCCGCCTTTCCATCAAGAGACACAAGGAGTAAGATAGTTTTTACATCCCGCAATAAAGGCATCTCANCACATGTAGATCCGAGAGGCTTGCTTCATGAACCAGGGTTCTTAAATGCAGAAGATAGTTGGGAATTGTTTCATAAGAAAGCTTTTCCAAGAAATAATGATCCAGAATTCACAATTTGCAATGACTTTGAAAGATTAGGCAGAGACATGGTTGCAAAATGTGCTGGTCTGCCATTGGCTATTGTTGTGCTTGNAGGGCTTTTGGCTACAAAGGAAACTGTCAGTGAGTGGGAAACAATACATAAATATATAAGTTCATACCTAAGAAGAGGAGAGGTACATGAAAGGCAGTCNAGATTAGCTGAGGTGTTGGATTTAAGTTACAATGACTTGCCTTATCAACTCAAACCATGTTTTCTTTATTTAAGTCAATTCCCTGAAGACTNTGAGATACCAAAAAATAAATTGATTCAATTATGGGTGGCAGAAGGTGTTGTGTCATCTCAATATGAGATTGAAAGGAATGAAACACTGGAGGATGTTGCCGAGCGTTACCTAGGTAGCTTAATTAGCCGTTGCATGGTTCAAGTTGGTCAGATGGGGTCTACTGGAAGGATAAAAACTTGTCGACTCCATGATTTAATGCGTGATCTGTGTTTGTCAAAGGCCAGAATGGAACATTTTCTCTACATTATTGGTGGACCACAACAAAATAATAGCATTNATGTCGTATCTTCATCTAATCTATCAGATGAAAGACAAACTGGTGGAGTTCGCAGACTTGCTGTCTTTTTGGATCAACATGTTGATCAATTGGTTCCACCTAATGAGCAAGTGAATCAACACCTCAGATCTCTTGTATATTTCCACGATAAGAAGTGTAGAGTGGAAAACTGGATGCTAATAAAAGATGTTTTTGAGAACTTCAAANTACTTAGAGTTCTAGATCTTGAAGGAATTAAGGGGTCAAAGGGNCAGTCATTGCCTAAAGAAGTGGGAAATCTATTATGGTTGAAGTTTTTGAGTCTGAAAAGAACTCGTATACAAATTCTGCCATCTTCATTGGGCAAATTGGAGAATTTGCAGACCCTAAATTTGCAAACTGTCAATAAAGTGAGTTGGGATTCAACTGTGGAAATTCCAAACGTAATATGGGAGTTGAAACGGTTGAGACATCTATATCTCCCTAATTGGTGTGGAAATGTTTCTGACAACCTGCAACTGGAAAATCTTATCAACTTACAGACANTGGTAAATTTCCCCGCCAGCAAATGCGATGTAAAAGATCTGCTAAAATTGAAGAAGCTCAGAAAATTAGTACTGAATGACCCGAGACACTTTCAAAAGTTTACTGAAAGTTTCAGTCCCCCTAATGAAAGGTTGGATTGCCTTCAATCATTGTCCTTGAGGACTGACATGCTTTCATTCCCTGATCAAGTAGTAGATGTTCAGAAATTGGTGCTAGGGTGTCCATCCCTTTGCAAACTACACGTAGAAGGGCGGATGGAGAGACTTCCAGAAGCTNGACTATTTCCTCCACAGCTTTCAAAGTTAACTTTATGGGGGTGTAAACTCGTGGAAGACCCAATGACAACATTAGAGAGGCTTCCTAACTTGAAGTTCTTGAGTGGATGGGAAATGTTTGTTGGAAAGAAAATGGTATGCTCACCAAATGGNTTCCCTCAACTGAAAGCTCTAGTACTTCGTGGCTTGCCTGATTTAGAGGAGTGGGTGGTAGAGAATCAAGCCTTGCCTAAANTGTACCGGTTGAGCATATCTGATTGTAACAAGTTGAAGACTGTTCCTGATGGATTAAGATTTGTTGCTGGTCTACGGGAGCTAGAGATCAGATGGATGCCTAAATCATTCAAGACTAGGCTCGAAACTGATGGAGAGGACTACCACAAAGTCCAGCATGTGCCATCCATTATATTTTTGAACTAGGCCTGCAATTTCAAAAGATCAAATACATGGTACATGTTACTTTCTCAAAAATTCTATTTTTCTTTGACTATACCAGCCTTATTATGTCTATTCTGCTTTCTTTTATATATTGATTATTAAAATTGCTATCTCCTGGCCAAACAAAATGAGAACTAGAGCACACTGCACACCTGTTGTCAGTGTTGTTGAATATTGATAACATTCTCTAAACTTTCATTAATAATCTTCTTTTTTATATGTAAAATGGAAAGGAAGCTATTTTGGTAGAATTTTGTTTACACCATAATTCATTCTTACAAATTCCTGTACTTCATTTGCAGTCGGGCATTGGGTGTCCTCTTTCTTGTGCTTCAGAAGCTCAAGTTTCAAACCCTGAACTTTTAAGCGGTATACCTCTATGTTTATTTGGATGGTGTCTTGATGAATTCAGTTGAATTTATTTAATATGCATTTACATATATATATATGTGTGTGTGTGTGTGTGTGTGTCGGGTTATGTGTGGAATGGCCAAATGGGTTTCCTTATATGTTTTTTTTAATCTGGGTATTCTCTACGCACAACTGTGAAGACTAGTCCCTTCACGTACTGAGATCCATTTAAGAGTTTGACATGTACCAATAGATATTCTTTCATACACACAGCGTGGGATCGAACCTTGATATCATGCTTAAGGGACTTGGGTATCTACCACTTGTATCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00687	112082	116064	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0043531 ADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000687s00031813.1	PF00931.17	NB-ARC	157	448	3.00E-80

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.326
SRR1783600	control	6.455
SRR1783602	moderate drought stress	9.352
SRR1811619	moderate drought stress	9.330

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.683
DRR006520	Root Summer glycyrrhizin high producing strain	5.473
DRR006521	Root Winter glycyrrhizin high producing strain	4.911
DRR006522	Root Winter glycyrrhizin high producing strain	4.795
DRR006523	Root Summer glycyrrhizin low producing strain	4.941
DRR006524	Root Summer glycyrrhizin low producing strain	4.665
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.789
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.008

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	14.263
SRR2868004	Drought Stress (root)	18.575
SRR2967015	Control (root)	17.343

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.709
SRR9715740	Leaf	8.828
SRR9715741	Leaf	7.429
SRR9715739	Root	0.949
SRR9715742	Root	5.476
SRR9715743	Root	4.552

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.694
SRR8749028	MeJA induced 9h	14.272
SRR8749029	MeJA induced 9h	12.274
SRR8749030	Uninduced	12.857
SRR8749031	Uninduced	29.935
SRR8749032	Uninduced	18.685

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.136
SRR8400027	Control - Root	15.052