Gene detail information of Glyur000687s00031808 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH21726.1 | 6.30E-11 | Nodule Cysteine-Rich (NCR) secreted peptide [Medicago truncatula] |
| trEMBL | tr|A0A072TX06|A0A072TX06_MEDTR | 2.00E-11 | Nodule Cysteine-Rich (NCR) secreted peptide {ECO:0000313|EMBL:KEH21726.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00687 | 91278 | 94533 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 100.972 |
| SRR1783600 | control | 95.698 |
| SRR1783602 | moderate drought stress | 51.653 |
| SRR1811619 | moderate drought stress | 54.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.656 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.847 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.109 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.572 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.592 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.845 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 172.595 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 169.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.612 |
| SRR2868004 | Drought Stress (root) | 34.136 |
| SRR2967015 | Control (root) | 45.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.752 |
| SRR9715740 | Leaf | 51.029 |
| SRR9715741 | Leaf | 1.996 |
| SRR9715739 | Root | 68.669 |
| SRR9715742 | Root | 42.108 |
| SRR9715743 | Root | 50.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.017 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 89.938 |
| SRR8400027 | Control - Root | 102.667 |