Gene detail information of Glyur000685s00029732 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52870.1 | 4.00E-134 | IQ calmodulin-binding motif family protein |
| NR | XP_004497614.1 | 0 | PREDICTED: uncharacterized protein LOC101489949 [Cicer arietinum] |
| COG | YP_006808982.1 | 1.00E-14 | hypothetical protein O3I_020245 [Nocardia brasiliensis ATCC 700358] |
| trEMBL | tr|V7BJV0|V7BJV0_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW17325.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00685 | 26100 | 30134 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.712 |
| SRR1783600 | control | 31.092 |
| SRR1783602 | moderate drought stress | 39.153 |
| SRR1811619 | moderate drought stress | 39.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.412 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.839 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.828 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.396 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.505 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.509 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.625 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.184 |
| SRR2868004 | Drought Stress (root) | 47.461 |
| SRR2967015 | Control (root) | 65.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 44.654 |
| SRR9715740 | Leaf | 53.243 |
| SRR9715741 | Leaf | 45.099 |
| SRR9715739 | Root | 17.056 |
| SRR9715742 | Root | 48.475 |
| SRR9715743 | Root | 43.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.334 |
| SRR8749028 | MeJA induced 9h | 28.495 |
| SRR8749029 | MeJA induced 9h | 34.225 |
| SRR8749030 | Uninduced | 42.662 |
| SRR8749031 | Uninduced | 21.596 |
| SRR8749032 | Uninduced | 37.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.644 |
| SRR8400027 | Control - Root | 33.635 |