Gene detail information of Glyur000681s00027304 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43150.1 | 2.00E-08 | |
| NR | XP_007150829.1 | 1.01E-43 | hypothetical protein PHAVU_005G184200g [Phaseolus vulgaris] |
| trEMBL | tr|V7C0D7|V7C0D7_PHAVU | 4.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:ESW22823.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00681 | 7547 | 11725 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.459 |
| SRR1783600 | control | 10.282 |
| SRR1783602 | moderate drought stress | 20.409 |
| SRR1811619 | moderate drought stress | 20.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.908 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.583 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.658 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.264 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.148 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.105 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.459 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.449 |
| SRR2868004 | Drought Stress (root) | 39.708 |
| SRR2967015 | Control (root) | 37.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.037 |
| SRR9715740 | Leaf | 22.511 |
| SRR9715741 | Leaf | 18.173 |
| SRR9715739 | Root | 6.846 |
| SRR9715742 | Root | 12.030 |
| SRR9715743 | Root | 11.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.314 |
| SRR8749028 | MeJA induced 9h | 3.638 |
| SRR8749029 | MeJA induced 9h | 5.656 |
| SRR8749030 | Uninduced | 9.050 |
| SRR8749031 | Uninduced | 3.743 |
| SRR8749032 | Uninduced | 5.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.099 |
| SRR8400027 | Control - Root | 19.992 |