Gene detail

Gene detail information of Glyur000680s00022873

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G18870.1	2.00E-79	Mitochondrial transcription termination factor family protein
NR	XP_004493043.1	6.41E-164	PREDICTED: uncharacterized protein LOC101492839 [Cicer arietinum]
trEMBL	tr\|K7MUL5\|K7MUL5_SOYBN	6.00E-148	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G48450.2}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00680	26035	26883	-

Gene family

Gene family	subfamily
Transcription Factors Family	mTERF

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

cellular_component
GO:0005739 mitochondrion

molecular_function
GO:0003690 double-stranded DNA binding

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Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000680s00022873.1	PF02536.9	mTERF	80	277	1.80E-33

Expression pattern

SRA Experiment	Description	TPM
SRR1783599	control	1.445
SRR1783600	control	1.382
SRR1783602	moderate drought stress	1.284
SRR1811619	moderate drought stress	1.351

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.859
DRR006520	Root Summer glycyrrhizin high producing strain	3.077
DRR006521	Root Winter glycyrrhizin high producing strain	1.428
DRR006522	Root Winter glycyrrhizin high producing strain	1.280
DRR006523	Root Summer glycyrrhizin low producing strain	2.911
DRR006524	Root Summer glycyrrhizin low producing strain	2.995
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.573
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.909

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.144
SRR2868004	Drought Stress (root)	2.433
SRR2967015	Control (root)	2.212

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.384
SRR9715740	Leaf	11.545
SRR9715741	Leaf	6.925
SRR9715739	Root	3.862
SRR9715742	Root	3.847
SRR9715743	Root	3.338

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.616
SRR8749028	MeJA induced 9h	0.680
SRR8749029	MeJA induced 9h	0.856
SRR8749030	Uninduced	0.327
SRR8749031	Uninduced	0.381
SRR8749032	Uninduced	0.552

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.604
SRR8400027	Control - Root	1.634