Gene detail information of Glyur000679s00026745 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G09060.1 | 3.00E-60 | |
| NR | XP_004490388.1 | 5.39E-167 | PREDICTED: girdin-like [Cicer arietinum] |
| trEMBL | tr|K7M7Q6|K7M7Q6_SOYBN | 6.00E-154 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G35536.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00679 | 117427 | 120757 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.724 |
| SRR1783600 | control | 2.741 |
| SRR1783602 | moderate drought stress | 1.252 |
| SRR1811619 | moderate drought stress | 1.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.488 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.432 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.228 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.211 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.965 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.441 |
| SRR2868004 | Drought Stress (root) | 5.591 |
| SRR2967015 | Control (root) | 8.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.830 |
| SRR9715740 | Leaf | 0.588 |
| SRR9715741 | Leaf | 0.480 |
| SRR9715739 | Root | 0.487 |
| SRR9715742 | Root | 0.448 |
| SRR9715743 | Root | 0.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.033 |
| SRR8749028 | MeJA induced 9h | 9.685 |
| SRR8749029 | MeJA induced 9h | 12.442 |
| SRR8749030 | Uninduced | 0.539 |
| SRR8749031 | Uninduced | 0.635 |
| SRR8749032 | Uninduced | 1.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.493 |
| SRR8400027 | Control - Root | 5.694 |