Gene detail information of Glyur000678s00024767 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59613.2 | 4.00E-21 | |
| NR | XP_007132110.1 | 2.60E-30 | hypothetical protein PHAVU_011G067300g [Phaseolus vulgaris] |
| Swissprot | tr|P80497|ATPY_SOLTU | 1.00E-08 | ATP synthase 6 kDa subunit, mitochondrial (Fragment) |
| trEMBL | tr|V7AEY4|V7AEY4_PHAVU | 1.00E-30 | Uncharacterized protein {ECO:0000313|EMBL:ESW04104.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00678 | 64289 | 66415 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 64.763 |
| SRR1783600 | control | 66.121 |
| SRR1783602 | moderate drought stress | 33.809 |
| SRR1811619 | moderate drought stress | 34.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 95.270 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 94.545 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 40.986 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 39.170 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 75.917 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 77.519 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 65.694 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 65.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 199.804 |
| SRR2868004 | Drought Stress (root) | 141.429 |
| SRR2967015 | Control (root) | 117.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 82.521 |
| SRR9715740 | Leaf | 52.682 |
| SRR9715741 | Leaf | 78.258 |
| SRR9715739 | Root | 23.415 |
| SRR9715742 | Root | 37.768 |
| SRR9715743 | Root | 34.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.158 |
| SRR8749028 | MeJA induced 9h | 24.472 |
| SRR8749029 | MeJA induced 9h | 26.865 |
| SRR8749030 | Uninduced | 15.726 |
| SRR8749031 | Uninduced | 8.109 |
| SRR8749032 | Uninduced | 10.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 95.814 |
| SRR8400027 | Control - Root | 101.382 |