Gene detail information of Glyur000678s00024758 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G03090.2 | 1.00E-144 | sequence-specific DNA binding;sequence-specific DNA binding transcription factors |
| NR | XP_007150277.1 | 0 | hypothetical protein PHAVU_005G140400g [Phaseolus vulgaris] |
| trEMBL | tr|V7C057|V7C057_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW22271.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00678 | 17230 | 34762 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.065 |
| SRR1783600 | control | 7.016 |
| SRR1783602 | moderate drought stress | 14.821 |
| SRR1811619 | moderate drought stress | 14.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.699 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.643 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.887 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.102 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.680 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.584 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.516 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.819 |
| SRR2868004 | Drought Stress (root) | 23.264 |
| SRR2967015 | Control (root) | 39.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.755 |
| SRR9715740 | Leaf | 9.271 |
| SRR9715741 | Leaf | 14.106 |
| SRR9715739 | Root | 1.280 |
| SRR9715742 | Root | 8.879 |
| SRR9715743 | Root | 8.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.332 |
| SRR8749028 | MeJA induced 9h | 35.426 |
| SRR8749029 | MeJA induced 9h | 20.672 |
| SRR8749030 | Uninduced | 29.068 |
| SRR8749031 | Uninduced | 14.858 |
| SRR8749032 | Uninduced | 16.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.895 |
| SRR8400027 | Control - Root | 18.715 |