Gene detail information of Glyur000677s00026182 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G12900.1 | 1.00E-157 | |
| NR | XP_003539397.1 | 0 | PREDICTED: uncharacterized protein LOC100814681 [Glycine max] |
| trEMBL | tr|I1LQH0|I1LQH0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G05900.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00677 | 99862 | 103444 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.381 |
| SRR1783600 | control | 7.325 |
| SRR1783602 | moderate drought stress | 5.782 |
| SRR1811619 | moderate drought stress | 5.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.400 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.396 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.846 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.417 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.010 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.889 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.245 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.543 |
| SRR2868004 | Drought Stress (root) | 7.360 |
| SRR2967015 | Control (root) | 4.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.287 |
| SRR9715740 | Leaf | 10.793 |
| SRR9715741 | Leaf | 7.130 |
| SRR9715739 | Root | 0.492 |
| SRR9715742 | Root | 4.948 |
| SRR9715743 | Root | 3.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.119 |
| SRR8749028 | MeJA induced 9h | 0.276 |
| SRR8749029 | MeJA induced 9h | 0.474 |
| SRR8749030 | Uninduced | 0.303 |
| SRR8749031 | Uninduced | 0.448 |
| SRR8749032 | Uninduced | 0.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.509 |
| SRR8400027 | Control - Root | 3.582 |