Gene detail information of Glyur000677s00026181 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G12070.1 | 1.00E-148 | |
| NR | KHN25264.1 | 0 | hypothetical protein glysoja_010181 [Glycine soja] |
| trEMBL | tr|I1LQH2|I1LQH2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G05920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00677 | 81078 | 96705 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.253 |
| SRR1783600 | control | 10.323 |
| SRR1783602 | moderate drought stress | 16.181 |
| SRR1811619 | moderate drought stress | 16.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.157 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.118 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.123 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.924 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.443 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.552 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.895 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.288 |
| SRR2868004 | Drought Stress (root) | 23.253 |
| SRR2967015 | Control (root) | 23.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.668 |
| SRR9715740 | Leaf | 12.865 |
| SRR9715741 | Leaf | 15.003 |
| SRR9715739 | Root | 11.647 |
| SRR9715742 | Root | 13.911 |
| SRR9715743 | Root | 12.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.786 |
| SRR8749028 | MeJA induced 9h | 3.351 |
| SRR8749029 | MeJA induced 9h | 2.197 |
| SRR8749030 | Uninduced | 3.535 |
| SRR8749031 | Uninduced | 2.644 |
| SRR8749032 | Uninduced | 1.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.380 |
| SRR8400027 | Control - Root | 14.784 |