Gene detail

Gene detail information of Glyur000677s00026180.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G51140.1	4.00E-64	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
NR	XP_007131988.1	0	hypothetical protein PHAVU_011G057400g [Phaseolus vulgaris]
Swissprot	tr\|Q9C690\|BH122_ARATH	3.00E-76	Transcription factor bHLH122
trEMBL	tr\|V7AEH4\|V7AEH4_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW03982.1}

Sequence

Transcript Sequence

>Glyur000677s00026180.1
ATTTTATCAAAACCCACCTTTATTTTTTCACACTTCTAAAAATAGGATTAACTTGTGTTCTTTCTCTCTTGGGAAGAAGCATCCCTCTGCCACGTTCCACTCAGTCACATTTTGGTTTCTTCCCAAAATTGAGGGCATTCTAGTAAAACTGGAACTGAAACACACACACCAAATCTGAGAGCTGGATTTATGGCTCTGTTCACTCCCCATTGGCTGCACCTCCACAGCAACACAATGGATTGCTATTTTATAATCCTTTTCCATCCTTTCTCTTGAACCTTCCCTTAGAGGCATCTTCATTCTTCACCACCACTCTCACCACTACACGCAACGATAAATAAACCCAACAAAAAGNAGAAAAATACAACAAAGGCGTTGCAGTGCAGATACACAAAGAGGAATTGCGTTGGAAAACAGAGGATTCCAAGAAGTTGGTGTGATCTGATAAGAGAGGTTTGAAGATAAGAAAAAGAAAAAGAATAAAACTTNGGTTATTTTTTCTGAGTGAAATTCCAATAAAGGGTGAATAATAATAATAATGGAGTCAGATCTTCAGCAGCACTCTCCGGTGTTTTTGGATCACCACCACCAGCAACACCAGCAAATGAATTCAGGGCTGACACGGTTCCGATCGGCTCCAAGTTCATATTTTTCGAACATCATTGACCGTGAGTTCTACGAACACCTCTTCAATAAACCCTCCAGCCCCGAAACGGAGAGGATTTTCGCACGGTTTATGAACAGTCTCGGTGGTGGTGGCGATGCTGCTGAACCTGAAAGTGCTGCTCTCGCTCAGAATCTCTCAACTGTTCAGCAGCAACAACAACAACAACTCCCTTCTGCTGCTGCGGTGAAGGAAGAGGTTGATCAGCAATCTCAGGCTATGCCATCTAATGAACCCGTGGTTCTCCACCAGCTACAGCAACAACAGCAGCAACAGAGTAATATCAATAATTATGGTTCTTCTGCTCCTCCTCCTCAGAGTTTTTACCAAAGCTCAGGACGACCACCTTTGCCAAATCAGATGAAGACTGGTCGTGGAAATACTTCCAATCTTATCAGACATGGTAGCTCACCTGCGGGGTTGTTTTCAAACATTAACATTGATAGTGGCTATGCTGCTATAAGGGGCATGGGAACTATGGGAGCTGCTGGTAACAACACTAGCGAGGAGACAAACTTTTCTCCCGCGGCAGCGGCGCGGTTGAAGAATGCGCCAAACTACTCGTCGGGGTTAATGTCATCAAGAGTTGAAATTGGGAATACAAGCAATACACAGAATAATCCAGAAACTGAAGGTTTTGCTGAAAGCCAGGGTAATGATTTTATCCCAAATTTCCCCGTAGGTCCATGGGAGGATTCTGCAATCATGCCTGACAATATGAGTACTGGTCTAAAAAGATACAGAGAGGATGATGTAAAACCGTTTTCTGGTTTAAATGCAGCTGAAAGCAAGAATGAAACTGGAGGCCAGCAGCCTTCTGCTCCTTTGGCTCATCAATTGAGTTTGCCGAATACTTCAGCGGAAATTGCAGCCATTGAGAAGATTTTGCAGTTCTCAGATTCTGTTCCCTGCAAAATTCGCGCCAAGCGGGGCTGTGCCACTCACCCAAGAAGCATTGCAGAGAGGGTTAGAAGAACAAAAATTAGTGAGCGAATGAGGAAACTACAAGATCTCGTGCCAAACATGGATAAGCAAACAAACACAGCAGACATGTTGGACTTGGCTGTTGAGTACATTAAAGACCTTCAAAAGCAAGTCCAGACTCTTTCAGACAATCGCGCTAAGTGTACGTGTTCACACAAGCAGCAGCAATAGACACACCCGAGTTATTAGTTGTGTCTATGTACAGATTTGTAATTTGCAATAATTTGGTGTAGAAACTAGAGCAGCTATAGCTAGCTTTCTGATATTTATTATGTAGCCAGCCACTTCTTCCGCGGGAGTGGTGGGTGGGGGAGGAATTCGCTCATAAAAGTTGACTTTTAAGATCATAAAATTTGATTTGATGATGATGCCGCCACATACATATGCAAAGAAAGCTTTGTGTACAAAATTTTCTGATGCAAGTCTATTACGTTACGCCTTTATTACTGTTGGGTCCCCCCAATTATTTTTAGGGGATGGAGGAGGATGATGGGGTGGAGAGGAAAATTGTTGTTTTGCATTTTGCATCTTCATGGACTTGTTGGTTATGTTATGGAGGAACGTCAANAGGGATGTTATGTTATGTATGGGTTTGGTTTAACGATATATATGACGTGGAGACATGGGGGACCGAAACNGACATTGTTTTGTTGGTTATACTATGAGTACAGTGGTTTTTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00677	71478	75219	+

Gene family

Gene family	subfamily
Transcription Factors Family	bHLH

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0046983 protein dimerization activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000677s00026180.1	PF00010.21	HLH	360	405	3.00E-10

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	36.803
SRR1783600	control	36.940
SRR1783602	moderate drought stress	53.154
SRR1811619	moderate drought stress	53.155

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	40.905
DRR006520	Root Summer glycyrrhizin high producing strain	40.670
DRR006521	Root Winter glycyrrhizin high producing strain	54.325
DRR006522	Root Winter glycyrrhizin high producing strain	52.587
DRR006523	Root Summer glycyrrhizin low producing strain	47.259
DRR006524	Root Summer glycyrrhizin low producing strain	46.725
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.716
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.044

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	39.718
SRR2868004	Drought Stress (root)	36.397
SRR2967015	Control (root)	34.035

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	19.343
SRR9715740	Leaf	15.735
SRR9715741	Leaf	21.753
SRR9715739	Root	4.008
SRR9715742	Root	26.708
SRR9715743	Root	22.045

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	35.426
SRR8749028	MeJA induced 9h	48.608
SRR8749029	MeJA induced 9h	61.187
SRR8749030	Uninduced	25.454
SRR8749031	Uninduced	31.352
SRR8749032	Uninduced	24.846

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	46.163
SRR8400027	Control - Root	41.792