Gene detail

Gene detail information of Glyur000675s00024215.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G64950.1	4.00E-125	cytochrome P450, family 89, subfamily A, polypeptide 5
NR	XP_003540011.2	0	PREDICTED: cytochrome P450 89A9-like [Glycine max]
COG	YP_003735701.1	5.00E-25	cytochrome P450 [Halalkalicoccus jeotgali B3]
Swissprot	tr\|Q9SRQ1\|C89A9_ARATH	2.00E-147	Cytochrome P450 89A9
trEMBL	tr\|I1LP27\|I1LP27_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G01640.1}

Sequence

Transcript Sequence

>Glyur000675s00024215.1
ATGTCAAATCACAAGCAAAAGAACACACAATCTCATCTCATGCAAAATAGTTACATGGAAGCCTGGTTCATGATCATCCCAATTTTGTGCCTTAGCCTTTCATTAATTCTCAAAGCCATTTTCTTCCCTCATTCTCCCCTCCCTCCGGGGCCTCCCAAAGTACCCATCATAAGCACCTTTAAATTGTTGCAACAATACATCACCGATCCTAAAACCCTTCTCCAGAATCTCCATGCAAAGTATGGTCCAATCTTCACTCTCCAAATGAGTTCTCACACAAACATTTTCATTGCCAACCGCTTCCTTGCACACCAAGCATTGATCCAAAACAGCACCACCTTCGCTGATCGACCCAAGGCCAATCCCACAAAGAGGGTCAAGTCCTATGCACATGCACGCAAGTGGGTGTTGGACATGCTTCTAGAACGCCTCAAATCTTATGATTCTTCACATGCAAGCAGCAGTAACAACAGCAACAACAGCCCCACAAGGGTCGTTGACCATTTTCGATATGGCATGTTCTGCTTGCTGGTTCTGATGTGTTTTGGTGACAAACTCGATGAGGATCAGATCAGAGAGATCGAGGAAAGTCAAAGGGTCATGCTTCTGAGCTTTGCCAGGTACAATGTCTTGAATTTTTGGCCACCAGTTACAAGGGTGNTGTTCTGGAAGAGGTGGAAGGAGTTCTTACAGCTACGGAGAGAGCAAGAAGCTGTTTTGATTCCTTATATAAATGCTAGAAGGAAAGCCAAGGAAGAGAGACTAAGCAATGGAAATGGGCCAGAGAAAAGGAGCAAGCTTGATGATGGGAAAATCTGCACCTTGTGCTCGGAGTTTCTGAATGCTGGAACTGATACAACTACAACTGCATTGGAATGGATCATGGCAAATTTGGTGAAATACCCAGATATCCAAGAGAGGGTTGTGGAGGAGATTAGAGGGGTCATTGGTGACAAAGAGGATAAGGAAATAAAGGAAGAAGATTTGGAGAAATTGGGGTATCTTAAAGCAGTGATCTTGGAGGGGTTGAGGCGTCACCCACCACTACACTATGTGGCTCCTCATAGAGTAACAAAGGATGTTGTTTTGANTGGTTATTTGGTGCCTACCTATGCTTCTGTGAATTTCTTGGTGGCTGAGATAGGGAGGGATCCAACAGCTTGGGATGACCCTTTGGCCTTTAAGCCAGAGAGATTCATGAACAACAACAACAACAACAATAACATGTTTGATATAATGGGGAGTAAAGAGATAAAGATGATGCCATTTGGGGCAGGGAGGAGAATGTGTCCTGGCTATGGTTTAGCAGTGCTCCACTTGGAATACTTTGTGGCCAATTTTGTTTGGAATTTTGAGTGGAAGGCTGTGGAGGGAGATGAGATTGATCTGTCTGAGAAGCTGCAGTTCACAATGGTGATGAAGAATCCTTTGAAGGTTCAATTAATACCTAGGCTTTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00675	2246	4679	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP89A5

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000675s00024215.1	PF00067.17	p450	48	129	3.50E-08
Glyur000675s00024215.1	PF00067.17	p450	152	481	1.50E-64

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.177
SRR1783600	control	0.198
SRR1783602	moderate drought stress	0.172
SRR1811619	moderate drought stress	0.156

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.305
DRR006520	Root Summer glycyrrhizin high producing strain	0.444
DRR006521	Root Winter glycyrrhizin high producing strain	0.621
DRR006522	Root Winter glycyrrhizin high producing strain	0.671
DRR006523	Root Summer glycyrrhizin low producing strain	0.226
DRR006524	Root Summer glycyrrhizin low producing strain	0.180
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.016
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.846

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.979
SRR2868004	Drought Stress (root)	3.252
SRR2967015	Control (root)	3.667

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.143
SRR9715740	Leaf	1.917
SRR9715741	Leaf	0.480
SRR9715739	Root	0.304
SRR9715742	Root	0.207
SRR9715743	Root	0.191

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.293
SRR8749028	MeJA induced 9h	0.404
SRR8749029	MeJA induced 9h	0.587
SRR8749030	Uninduced	0.330
SRR8749031	Uninduced	0.185
SRR8749032	Uninduced	0.059

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.751
SRR8400027	Control - Root	1.686