Gene detail information of Glyur000674s00021155 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66800.1 | 6.00E-23 | |
| NR | AFK37699.1 | 9.69E-68 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SBQ7|I3SBQ7_LOTJA | 4.00E-68 | Uncharacterized protein {ECO:0000313|EMBL:AFK37699.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00674 | 77469 | 79309 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.742 |
| SRR1783600 | control | 4.463 |
| SRR1783602 | moderate drought stress | 2.209 |
| SRR1811619 | moderate drought stress | 2.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.480 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.683 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.053 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.906 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.215 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.875 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.858 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.418 |
| SRR2868004 | Drought Stress (root) | 31.983 |
| SRR2967015 | Control (root) | 33.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.266 |
| SRR9715740 | Leaf | 0.168 |
| SRR9715741 | Leaf | 1.049 |
| SRR9715739 | Root | 10.547 |
| SRR9715742 | Root | 11.948 |
| SRR9715743 | Root | 10.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.286 |
| SRR8749028 | MeJA induced 9h | 0.581 |
| SRR8749029 | MeJA induced 9h | 2.919 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.588 |
| SRR8400027 | Control - Root | 36.223 |