Gene detail information of Glyur000674s00021148 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36980.1 | 7.00E-121 | |
| NR | XP_004511931.1 | 0 | PREDICTED: CLK4-associating serine/arginine rich protein-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|G7K6P7|G7K6P7_MEDTR | 0 | Arginine/serine-rich splicing factor {ECO:0000313|EMBL:AES94704.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00674 | 28625 | 34438 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000674s00021148.1 | PF09750.4 | DRY_EERY | 39 | 175 | 2.30E-34 |
| Glyur000674s00021148.3 | PF09750.4 | DRY_EERY | 39 | 175 | 1.10E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.381 |
| SRR1783600 | control | 26.734 |
| SRR1783602 | moderate drought stress | 50.389 |
| SRR1811619 | moderate drought stress | 50.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 47.302 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 46.415 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 50.248 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 49.222 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 52.423 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 52.767 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.102 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 83.017 |
| SRR2868004 | Drought Stress (root) | 107.626 |
| SRR2967015 | Control (root) | 105.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 42.540 |
| SRR9715740 | Leaf | 43.094 |
| SRR9715741 | Leaf | 57.909 |
| SRR9715739 | Root | 5.147 |
| SRR9715742 | Root | 28.567 |
| SRR9715743 | Root | 21.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 72.149 |
| SRR8749028 | MeJA induced 9h | 101.714 |
| SRR8749029 | MeJA induced 9h | 75.706 |
| SRR8749030 | Uninduced | 133.706 |
| SRR8749031 | Uninduced | 153.610 |
| SRR8749032 | Uninduced | 107.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 92.425 |
| SRR8400027 | Control - Root | 81.857 |