Gene detail information of Glyur000674s00021142.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G67030.11.00E-123zeaxanthin epoxidase (ZEP) (ABA1)
NRNP_001241348.10zeaxanthin epoxidase, chloroplastic-like [Glycine max]
COGYP_631595.12.00E-21FAD-dependent oxidoreductase [Myxococcus xanthus DK 1622]
Swissprottr|O81360|ABA2_PRUAR4.00E-169Zeaxanthin epoxidase, chloroplastic (Precursor)
trEMBLtr|G0Z350|G0Z350_SOYBN0Zeaxanthin epoxidase, chloroplastic {ECO:0000256|PIRNR:PIRNR036989}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold0067420625928+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K09838ZEP, ABA1EC:1.14.15.21Carotenoid biosynthesismap00906


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000674s00021142.1PF01494.14FAD_binding_3471167.20E-10
Glyur000674s00021142.1PF00498.21FHA2142907.00E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.045
SRR1783600control5.279
SRR1783602moderate drought stress5.063
SRR1811619moderate drought stress5.242

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.202
DRR006520Root Summer glycyrrhizin high producing strain9.832
DRR006521Root Winter glycyrrhizin high producing strain16.388
DRR006522Root Winter glycyrrhizin high producing strain16.366
DRR006523Root Summer glycyrrhizin low producing strain13.092
DRR006524Root Summer glycyrrhizin low producing strain13.188
DRR006525Leaf Summer glycyrrhizin high producing strain25.386
DRR006526Leaf Summer glycyrrhizin high producing strain26.276

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)16.966
SRR2868004Drought Stress (root)18.333
SRR2967015Control (root)12.566

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf22.849
SRR9715740Leaf24.768
SRR9715741Leaf29.132
SRR9715739Root1.864
SRR9715742Root3.254
SRR9715743Root3.179

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.367
SRR8749028MeJA induced 9h1.776
SRR8749029MeJA induced 9h3.810
SRR8749030Uninduced3.010
SRR8749031Uninduced0.898
SRR8749032Uninduced1.664

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root10.765
SRR8400027Control - Root8.156

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved