Gene detail

Gene detail information of Glyur000673s00024289

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G28220.1	3.00E-102	purine permease 3
NR	XP_004501676.1	0	PREDICTED: purine permease 1-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q9FZ95\|PUP3_ARATH	1.00E-141	Purine permease 3
trEMBL	tr\|G7J4H6\|G7J4H6_MEDTR	0	Purine permease-like protein {ECO:0000313\|EMBL:AES73112.2}

Sequence

Transcript Sequence

>Glyur000673s00024289.1
ATGGCAGATGAAAAGGAAGGAGAAAAAGAGAGAAGGATAAAGAGAATCCTTCTAATGATAAACTGCATCATGCTAGCCATAGGCACCGCCGGTGGTCCCCTCATAATGCGTCTCTACTTTATCCACGGTGGCAACCGCGTTTGGCTCTCTAGTTTCCTCGAAACCGCCGGTTTCCCCTTCATGTTGTTCCCCCTCGCCGTCTCTTACATCAACCGCCGCCGAGACCACCGTAACAACCTTCCCCCCTCCGCCGTAACCGTCGAAACGACAGCGAAACTGAAAATGATCTCCATGAAGCCTCCTCTGTTCTTNGCCTCTGCCTTCATCGGAATCCTCACCGGCCTCGACGACTACCTCTACGCCTACGGCGTTAAGAGGCTTCCGGTGTCCACGTCAGCACTCATCATCGCCTCACAGCTCGCCTTCACCGCCATCTTCGCCTTCCTCCTTGTNAAACAGAGGTTCACCTCTTACTCGGTAAACGCCGTCGTTTTGCTCACGGTTGGAGCTGGCGTTCTGGCCTTACACACCAGCGGGGATCGCCCTGCCGGTGAGTCCACCAGGCAATACGTCGTCGGTTTTGCCACCACCGTTGCCGCCGCAGTATTGTATGGGTTTGTTCTTCCCCTGATAGAGTTNGTGTACAAGAAAATCAAGCAACCTCTCACTTACTCACTAGTGATGGAGATTCAGCTTGTTATGTGCTTCTTTGCCACTCTCTTTTGTGCTATTGGGATGATTGTTAACAATGACTTCAAGGTGATTCCTAGAGAAGGGAGGGATTTTGGGCTTGGGGAAAGGAATTACTATGTTATTTTGGTGGCNAGTGGGATAATGTGGCAGGCGTTTTTCTTGGGGGCGATTGGGGTTATCTTTTGTGCCTCTTCTTTGTTGTCTGGTATTATAATTGCGGTGTTTCTTCCGGTGACTGAGGTGTTGGCCGTTATTTTCTACAAGGAGAAGTTTCAAGCGGAGAAAGTGGTTTCTCTTGTGCTCTCGCTTTGGGGCTTTGTGTCATACTTCTATGGTGAAATTAAACAAGCCAGGGAACTGAAGAAGAACCGTGTACCGGAAACAGAGGTGGTGCCTCAGACACTTGTTGGTATTCCTGGTTCGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00673	120394	121725	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000673s00024289.1	PF00892.15	EamA	94	173	1.70E-08
Glyur000673s00024289.1	PF03151.11	TPT	193	342	4.20E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.453
SRR1783600	control	2.391
SRR1783602	moderate drought stress	5.375
SRR1811619	moderate drought stress	5.262

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	14.083
DRR006520	Root Summer glycyrrhizin high producing strain	13.465
DRR006521	Root Winter glycyrrhizin high producing strain	0.583
DRR006522	Root Winter glycyrrhizin high producing strain	0.485
DRR006523	Root Summer glycyrrhizin low producing strain	6.570
DRR006524	Root Summer glycyrrhizin low producing strain	6.559
DRR006525	Leaf Summer glycyrrhizin high producing strain	23.412
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.263

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.502
SRR2868004	Drought Stress (root)	15.982
SRR2967015	Control (root)	24.704

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	40.494
SRR9715740	Leaf	31.311
SRR9715741	Leaf	28.557
SRR9715739	Root	4.392
SRR9715742	Root	6.990
SRR9715743	Root	7.304

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.072
SRR8749028	MeJA induced 9h	0.105
SRR8749029	MeJA induced 9h	0.053
SRR8749030	Uninduced	0.469
SRR8749031	Uninduced	0.149
SRR8749032	Uninduced	0.158

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	28.705
SRR8400027	Control - Root	25.337