Gene detail information of Glyur000673s00024283 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14600.1 | 3.00E-25 | Target SNARE coiled-coil domain protein |
| NR | XP_004501672.1 | 1.13E-64 | PREDICTED: bet1-like protein At4g14600-like [Cicer arietinum] |
| Swissprot | tr|Q8VXX9|BETL1_ARATH | 1.00E-53 | Bet1-like protein At4g14600 |
| trEMBL | tr|I1K9T6|I1K9T6_SOYBN | 7.00E-61 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G10370.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00673 | 93269 | 95245 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.930 |
| SRR1783600 | control | 5.963 |
| SRR1783602 | moderate drought stress | 5.918 |
| SRR1811619 | moderate drought stress | 5.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.972 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.810 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.583 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.467 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.804 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.250 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.431 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.354 |
| SRR2868004 | Drought Stress (root) | 28.771 |
| SRR2967015 | Control (root) | 26.789 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.957 |
| SRR9715740 | Leaf | 15.186 |
| SRR9715741 | Leaf | 15.703 |
| SRR9715739 | Root | 7.124 |
| SRR9715742 | Root | 9.537 |
| SRR9715743 | Root | 8.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.559 |
| SRR8749028 | MeJA induced 9h | 23.767 |
| SRR8749029 | MeJA induced 9h | 30.083 |
| SRR8749030 | Uninduced | 34.287 |
| SRR8749031 | Uninduced | 44.918 |
| SRR8749032 | Uninduced | 51.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.776 |
| SRR8400027 | Control - Root | 24.466 |