Gene detail information of Glyur000672s00022928 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25110.1 | 3.00E-167 | CBL-interacting protein kinase 25 |
| NR | XP_004498818.1 | 0 | PREDICTED: CBL-interacting serine/threonine-protein kinase 25-like [Cicer arietinum] |
| COG | YP_002432751.1 | 3.00E-35 | serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01] |
| Swissprot | tr|Q8W1D5|CIPKP_ARATH | 0 | CBL-interacting serine/threonine-protein kinase 25 |
| trEMBL | tr|A0A061GJK6|A0A061GJK6_THECC | 0 | CBL-interacting protein kinase 25 {ECO:0000313|EMBL:EOY29347.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00672 | 104355 | 105638 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.2.4 |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000672s00022928.1 | PF00069.20 | Pkinase | 13 | 267 | 3.00E-74 |
| Glyur000672s00022928.1 | PF03822.9 | NAF | 299 | 357 | 1.70E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.969 |
| SRR1783600 | control | 16.061 |
| SRR1783602 | moderate drought stress | 3.494 |
| SRR1811619 | moderate drought stress | 3.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 110.664 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 110.996 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 311.148 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 307.399 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 251.635 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 253.796 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.486 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.359 |
| SRR2868004 | Drought Stress (root) | 39.759 |
| SRR2967015 | Control (root) | 55.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 53.909 |
| SRR9715740 | Leaf | 54.812 |
| SRR9715741 | Leaf | 43.871 |
| SRR9715739 | Root | 25.191 |
| SRR9715742 | Root | 50.314 |
| SRR9715743 | Root | 46.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 108.985 |
| SRR8749028 | MeJA induced 9h | 135.177 |
| SRR8749029 | MeJA induced 9h | 83.662 |
| SRR8749030 | Uninduced | 5.749 |
| SRR8749031 | Uninduced | 2.220 |
| SRR8749032 | Uninduced | 9.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 88.787 |
| SRR8400027 | Control - Root | 125.647 |