Gene detail information of Glyur000672s00022921 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37590.1 | 3.00E-13 | Phototropic-responsive NPH3 family protein |
| NR | XP_004498809.1 | 1.14E-19 | PREDICTED: BTB/POZ domain-containing protein NPY1-like [Cicer arietinum] |
| Swissprot | tr|Q0WL52|NPY5_ARATH | 1.00E-15 | BTB/POZ domain-containing protein NPY5 |
| trEMBL | tr|G7I878|G7I878_MEDTR | 1.00E-19 | Phototropic-responsive NPH3 family protein {ECO:0000313|EMBL:AES59110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00672 | 38227 | 40638 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.313 |
| SRR1783600 | control | 0.322 |
| SRR1783602 | moderate drought stress | 0.369 |
| SRR1811619 | moderate drought stress | 0.375 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.008 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.260 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.235 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.392 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.062 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.587 |
| SRR2868004 | Drought Stress (root) | 1.148 |
| SRR2967015 | Control (root) | 0.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.514 |
| SRR9715740 | Leaf | 6.959 |
| SRR9715741 | Leaf | 4.030 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.365 |
| SRR9715743 | Root | 0.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.064 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.365 |
| SRR8400027 | Control - Root | 3.162 |