Gene detail information of Glyur000672s00022917 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25090.1 | 9.00E-39 | early nodulin-like protein 13 |
| NR | KHN37083.1 | 1.13E-82 | Early nodulin-like protein 1 [Glycine soja] |
| Swissprot | tr|Q9SK27|ENL1_ARATH | 4.00E-55 | Early nodulin-like protein 1 (Precursor) |
| trEMBL | tr|I1MX56|I1MX56_SOYBN | 4.00E-83 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G34040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00672 | 12651 | 17144 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000672s00022917.1 | PF02298.12 | Cu_bind_like | 36 | 121 | 1.40E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.225 |
| SRR1783600 | control | 4.270 |
| SRR1783602 | moderate drought stress | 3.402 |
| SRR1811619 | moderate drought stress | 3.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.024 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.075 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.856 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.537 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.598 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.333 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.298 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.460 |
| SRR2868004 | Drought Stress (root) | 8.783 |
| SRR2967015 | Control (root) | 8.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.095 |
| SRR9715740 | Leaf | 2.490 |
| SRR9715741 | Leaf | 2.711 |
| SRR9715739 | Root | 8.597 |
| SRR9715742 | Root | 6.108 |
| SRR9715743 | Root | 7.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.702 |
| SRR8749028 | MeJA induced 9h | 13.943 |
| SRR8749029 | MeJA induced 9h | 13.075 |
| SRR8749030 | Uninduced | 3.567 |
| SRR8749031 | Uninduced | 1.968 |
| SRR8749032 | Uninduced | 2.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.065 |
| SRR8400027 | Control - Root | 13.226 |