Gene detail information of Glyur000670s00020745 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15220.2 | 2.00E-57 | cytochrome c biogenesis protein family |
| NR | XP_006583073.1 | 1.71E-97 | PREDICTED: uncharacterized protein LOC102660330 [Glycine max] |
| COG | YP_032076.1 | 2.00E-18 | cytochrome c-type biogenesis protein cycL [Bartonella quintana str. Toulouse] |
| trEMBL | tr|I1KGM9|I1KGM9_SOYBN | 6.00E-98 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G02190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00670 | 81137 | 84084 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000670s00020745.1 | PF03918.9 | CcmH | 8 | 131 | 1.60E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.861 |
| SRR1783600 | control | 13.169 |
| SRR1783602 | moderate drought stress | 10.934 |
| SRR1811619 | moderate drought stress | 10.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.657 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.739 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.732 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.903 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.674 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.243 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.076 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.270 |
| SRR2868004 | Drought Stress (root) | 13.993 |
| SRR2967015 | Control (root) | 16.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.326 |
| SRR9715740 | Leaf | 7.020 |
| SRR9715741 | Leaf | 5.423 |
| SRR9715739 | Root | 7.249 |
| SRR9715742 | Root | 6.293 |
| SRR9715743 | Root | 5.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.297 |
| SRR8749028 | MeJA induced 9h | 20.907 |
| SRR8749029 | MeJA induced 9h | 26.917 |
| SRR8749030 | Uninduced | 10.164 |
| SRR8749031 | Uninduced | 4.845 |
| SRR8749032 | Uninduced | 12.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.570 |
| SRR8400027 | Control - Root | 10.275 |