Gene detail information of Glyur000669s00020859 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46420.1 | 1.00E-133 | Plant protein 1589 of unknown function |
| NR | XP_006598907.1 | 0 | PREDICTED: uncharacterized protein LOC100809603 isoform X1 [Glycine max] |
| trEMBL | tr|I1MKJ8|I1MKJ8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G02860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00669 | 114953 | 122632 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000669s00020859.1 | PF09713.5 | A_thal_3526 | 58 | 110 | 1.30E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.590 |
| SRR1783600 | control | 10.614 |
| SRR1783602 | moderate drought stress | 7.648 |
| SRR1811619 | moderate drought stress | 7.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.795 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.038 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.144 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.373 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.690 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.362 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.821 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 33.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.957 |
| SRR2868004 | Drought Stress (root) | 20.929 |
| SRR2967015 | Control (root) | 19.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 44.977 |
| SRR9715740 | Leaf | 64.769 |
| SRR9715741 | Leaf | 45.564 |
| SRR9715739 | Root | 4.321 |
| SRR9715742 | Root | 8.876 |
| SRR9715743 | Root | 7.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.941 |
| SRR8749028 | MeJA induced 9h | 17.751 |
| SRR8749029 | MeJA induced 9h | 13.144 |
| SRR8749030 | Uninduced | 13.984 |
| SRR8749031 | Uninduced | 6.077 |
| SRR8749032 | Uninduced | 9.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.826 |
| SRR8400027 | Control - Root | 18.107 |