Gene detail information of Glyur000669s00020852 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61740.2 | 0 | SET domain protein 14 |
| NR | KHN15936.1 | 0 | Histone-lysine N-methyltransferase ATX3 [Glycine soja] |
| COG | YP_003280830.1 | 9.00E-23 | nuclear protein SET [Comamonas testosteroni CNB-2] |
| Swissprot | tr|Q9M364|ATX3_ARATH | 0 | Histone-lysine N-methyltransferase ATX3 |
| trEMBL | tr|K7MEU6|K7MEU6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G02800.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00669 | 75682 | 84944 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | PHD |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000669s00020852.1 | PF00855.12 | PWWP | 206 | 303 | 6.70E-17 |
| Glyur000669s00020852.1 | PF00628.24 | PHD | 394 | 448 | 1.30E-08 |
| Glyur000669s00020852.1 | PF13832.1 | zf-HC5HC2H_2 | 579 | 684 | 5.60E-25 |
| Glyur000669s00020852.1 | PF00856.23 | SET | 843 | 903 | 1.50E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.760 |
| SRR1783600 | control | 2.760 |
| SRR1783602 | moderate drought stress | 2.694 |
| SRR1811619 | moderate drought stress | 2.711 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.850 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.642 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.154 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.088 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.853 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.946 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.416 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.214 |
| SRR2868004 | Drought Stress (root) | 13.307 |
| SRR2967015 | Control (root) | 11.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.775 |
| SRR9715740 | Leaf | 10.478 |
| SRR9715741 | Leaf | 14.876 |
| SRR9715739 | Root | 0.619 |
| SRR9715742 | Root | 6.595 |
| SRR9715743 | Root | 5.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.693 |
| SRR8749028 | MeJA induced 9h | 7.307 |
| SRR8749029 | MeJA induced 9h | 3.120 |
| SRR8749030 | Uninduced | 3.485 |
| SRR8749031 | Uninduced | 2.097 |
| SRR8749032 | Uninduced | 1.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.924 |
| SRR8400027 | Control - Root | 10.317 |