Gene detail

Gene detail information of Glyur000669s00020845

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G46500.2	phosphoinositide 4-kinase gamma 4
NR	XP_003548372.1	PREDICTED: phosphatidylinositol 4-kinase gamma 4-like [Glycine max]
Swissprot	tr\|Q9ZPY9\|P4KG4_ARATH	Phosphatidylinositol 4-kinase gamma 4
trEMBL	tr\|I1MKI4\|I1MKI4_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G02730.1}

Sequence

Transcript Sequence

>Glyur000669s00020845.1
CTTATTTTGGGATTTCTTTCGTCAAAAGCGTATGTATACGAGTAACTCTACGTATACAACACCTGGCGGCTACGCGCGTCTATCTTGTTCCACAATCCATTTCTCTCCCTCTTTGTGTTTCTCGTTCCTTTGTCAGAGTCAAATTATAACAACCCTTTTCCTTGTTTCCCGAATCTTGAATTAGAACTCTTCCTTCGACTCAAATATTCAAAACCCCATTTCCCTATTTCCTGTTATTGGTGCCAAAGCTTCAAACTTTCTGCTCCTCCTCCTTCTTCCTCGGTGGGTAAGAATCCGCTCTCTCTCAATTGAGTTCATAGCCATTGATTGATTCTGACACTTTCTGTGTTTTGATCCGAATCAGAAATTAGGGTTTGATTGGGGGGGAAAGATGAGGAATTAGGGCGTTGGGTCTGGATCTTTTTTCATCTTTTCCGTCAAAAAATTGTTCCTTGTTATGCATATTCTGTCCCAGTTTCATTTTGAGCTTGTTTGGTCTTAAGGGTAGGTGTGTCATCACCCCCTGGTAGCTCAAATTTGTACAAATAATAATATACATGGCTGTATTGTTGTGAATATTGGTAGGAGTTAGGGTTCAGGCTTAAGTCAAAGCCTCAGAAGTTTCGTTGGATTTTTCATTCCCTTAATCAATAGTGAAAAATGTCATCTGCTGGTGTCACCACTCTTAGTCCTGTTCCAAGGGAGCCATTGTTGTTTCCAAATGGATTCCCTTCTCCACTGCACTTGTCTTTGGATCATGAGTTCATTTTCATATACCTCTCTTATTCGGGGTGTTTGACACCGATGCGNGTTCTTCCCTCCGATACCATTGAGTCGGTGAAACTCAAAGTCCGAAGGAATGAGGGGCTTCCTTCATTGACAAACAAACAGAAGTTGGTTTGTAATGGCCGGGAGCTAGCGAGGAGCAATTCTCTGCTCAAGGACTATGGGGTTACCGAAGGAAACGTTCTGCATTTGGTAATCAGACTGTCGGATCTGCAGACCATCAGTGTGAGAACCTCTTGTGGGAAGGAATTCACCTTTCAGGTGGAAAGGTGCAGGGATGTTGGGTATGTTAAGCAGCAGATTGCGAAAAAGGAGAAACGGTTTGCTGATCCGGAACAGCAGGAAGTTGTGTGTAATGGGGAACGGCTTGAGGATCAGTGGCTCATTGATGATATCTGCAGCAGATATAATGATGTTGTGATACATGTTTTTGTTAGAATGAAATATGCAGAAGTTACAACAGGACTAGATGAGTTGTCCATTGCGGCAACGGAGTTGAATGATACAAAAAGTTATGATGCTAACGAAAATAATTGCGTGAGGAAATATGATGCTAGTAAAGAAGACACGGGAAGGGAGTATGAAGTTATCAAGCAAACTGTGCCAAGAAAGGCTCTGGACAGAGATCTTCTTTTGGAGCCAATTATTGTTAACCCGAAAATTGAATTAGCTTCAGGGATTTGGANTATGATAAACTCTACATATGATGGGCTAGATGGTGGACATTATCCAATCAGGTCTGCTGAGGGCACAGGTGGGGCTTACTTTATGCTAGACTCAACAGGACAAAAGTATGTATCTGTTTTTAAGCCTATTGATGAAGAGCCAATGGCTGTGAATAACCCTAGAGGTTTGCCTTTGTCATTAGATGGTGAAGGCTTGAAAAAGGGTACAAGAGTTGGTCAAGGAGCTTTCAGGGAAGTTGCAGCTTATATTTTGGACCATCCGGTGAGTGGCCACAGATCGTTATTTGGTGATGAGAAGGGCTTTGCTGGGGTTCCCGCGACTGTTATGGCTAAGTGCTTGCACAAAGGATTCAACCATCCGGGGGGCTTGACTGCTAAGATTGGCTCCTTGCAAATGTTCATGGAGAATAATGGAAGTTGTGAGGATATGGGACCTGGCACTTTCCCAGTGAAGGAAGTGCACAAAATCACAGTGCTGGACATACGACTGGCAAATGCAGATAGGCATGCTGGGAATATTTTGCTCGGCAGAGAGGAGGAAAATGACCAGGCTGTTTTGATTCCAATTGATCATGGATACTGCTTGCCCACGAGTTTTGAAGATTGTACCTTTGAATGGCTTTATTGGCCTCAAGCTCGCGAGCCATACTCCCCAGAGACCATTGACTACATAAAGTCCCTGGATGCTGAAGAAGATATTGCCCTTTTGAAGTTTCATGGATGGGATCTCCNGGTTGAATGCGCCCGCACTCTCCGAATCTCAACCATGCTTCTGAAGAAAGGAGTGGAGAGAGGGATGAGCCCCTATGCCATTGGGAGCCTGATGTGCAGAGAATCCTTGAACAAGGAGTCTGTGATTGAGGGAATTGTAAAAGCAGCACTGGATTCTGTTCTTCCTGGCACTAGTGAAGCCACGTATCTGGATGCGGTTTCTCACATTATGGACCAGCACCTTGATGAGATAGAAGGTGGTAGATAAGTGCCTGTGTACAAGTGTTTTAGTACATATCTGTAGCTCAAATGATTGTTTTTTTTCTTCTTCTTTTGTTGCACTATTATTTCACTGCAATGACTCCCTAGGTCCTTGACTTTTAGTAGGATATCCAATATTTCACATTCTTTCACTACTGTACCTTTTATTTACCTATTACCTTTGAATACAGCAATGTTAAGACAAATCATTTACCGTTTGAGTTATAGCTAGCTTAACTTTCTTATGTTTTAATTACTGGTGAGTGTTATGCTTTGTAGAAGTGAAATGTGGCACAAATACAATGTGAGAAATTGGGAACTATGTGTTGTTTGAACACAACAGATTTAGAGATACAGTCATTTTCTATTCCTTTACATTTTATTTCTTTCACTCTTATCAACCGTTGCCTCAAATCCCCAAAGGTTGCTTAGGCAATGGCTGGGTCTCCACTTGCATTAAAGCAAATCAATATGCCATTTGCAGAATTCATTACTCACAACTGTTGCTGCCTTTAGGAAATGGCGAAATGCAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00669	29885	33357	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0005515 protein binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0016773 phosphotransferase activity, alcohol group as acceptor

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000669s00020845.1	PF00240.18	ubiquitin	47	110	2.90E-12
Glyur000669s00020845.1	PF00240.18	ubiquitin	119	188	8.20E-06
Glyur000669s00020845.1	PF00454.22	PI3_PI4_kinase	294	548	2.10E-42

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.785
SRR1783600	control	7.848
SRR1783602	moderate drought stress	5.424
SRR1811619	moderate drought stress	5.377

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	23.775
DRR006520	Root Summer glycyrrhizin high producing strain	23.871
DRR006521	Root Winter glycyrrhizin high producing strain	8.425
DRR006522	Root Winter glycyrrhizin high producing strain	8.214
DRR006523	Root Summer glycyrrhizin low producing strain	32.723
DRR006524	Root Summer glycyrrhizin low producing strain	32.629
DRR006525	Leaf Summer glycyrrhizin high producing strain	20.725
DRR006526	Leaf Summer glycyrrhizin high producing strain	20.777

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	42.578
SRR2868004	Drought Stress (root)	63.603
SRR2967015	Control (root)	46.055

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	70.865
SRR9715740	Leaf	57.899
SRR9715741	Leaf	87.091
SRR9715739	Root	30.443
SRR9715742	Root	40.432
SRR9715743	Root	37.763

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	56.489
SRR8749028	MeJA induced 9h	69.345
SRR8749029	MeJA induced 9h	63.980
SRR8749030	Uninduced	53.679
SRR8749031	Uninduced	113.865
SRR8749032	Uninduced	68.851

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	31.700
SRR8400027	Control - Root	34.518