Gene detail

Gene detail information of Glyur000669s00020841

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G01300.1	5.00E-169	Eukaryotic aspartyl protease family protein
NR	XP_003529886.1	0	PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Glycine max]
Swissprot	tr\|Q9LS40\|ASPG1_ARATH	3.00E-124	Protein ASPARTIC PROTEASE IN GUARD CELL 1 (Precursor)
trEMBL	tr\|I1KHU8\|I1KHU8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G06100.1}

Sequence

Transcript Sequence

>Glyur000669s00020841.1
ATGGAAGAGAAAGCACAACATACCTTCCTTTATTCGCTGCTACTGTTTGTACTCTTTCTCTCTGTCTCAGCCGCTTCCTCAGTCCCACATCAGTTCCAAACCCAAACACTACTCCCTCACTCCCTCCCCCACCCACCCGAACTCTCATGGCCCGAATCCGAGTCCACGGAATCCGATCCGGAATCCTCCACCGCGCTCTCCGTTCACCTCCACCACATAGACGCCCTCTCCTTCAACAAAACCCCGGAACAGCTCTTCCACCTCAGGCTCCAAAGAGACGCAGCTAGGGTCAAAGCCTTCACCTCAATCTCCAAGGCCTTGTCAACCAACCATACCCGGCCCGGAACATCCGGACCCNGGTCGAGTTTCAGCAGCTCCGTCATATCGGGTCTCGCACAGGGGAGCGGCGANTACTTCACGCGCCTTGGCGTTGGAACTCCACCGAGGAACGTCTACATGGTGCTTGACACNGGAAGCGACGTCGTTTGGCTCCAGTGTGCGCCTTGCCGGAGTTGCTACTCACAAGCCGACCCGGTTTTCGACCCGAAGAAATCCAAATCCTTCGCCGGGATCCCCTGTGGTTCCCCACTCTGCCGCCGGCTGGACTCTCCNGGATGCAACAACCGGAACAACGTTTGCCAGTACCAGGTCTCCTACGGCGACGGTTCCTTCACCGTCGGCGACTTCTCCACCGANACGATGACGTTTAGACGAACCGCTGTGTCTGGTGTGGCACTTGGTTGCGGCCACGACAACGAGGGACTCTTCATTGGCGCCGCCGGTTTGTTAGGTCTCGGACAAGGGAGCTTATCGTTTCCCAGCCAAACCGGAAACCGGTTCGGACAGAAATTCTCCTACTGTTTAGTCGACCGGTCTGCTTCNGCCAAACCGTCTTCCGTCGTTTTTGGCGATTCGGCCGTTTCGCGAACCGCCCGGTTCACTCCGTTGCTGAAGAACCCAAAGCTCGACACGTTTTACTACGTTGAACTCCTCGGCATCAGCGTGGGTGGCAAGCCGGTTCGTGGCATTTCGGCCTCGCTCTTCCGGCTCGACCAAACCGGAAACGGAGGCGTAATTATTGACTCGGGCACGTCCGTTACGCGGTTTACCCGCCCTGCTTACGTGGCGCTTAGAAATGCTTTCCGGGTTGGGGCTGCCCGTTTGAAACGGGCGCCCGAGTTCTCGCTATTCGACACGTGTTACGACCTGTCCGGGCTCGCGGAGGTTAAGGTTCCGACGGTGGTGCTGCACTTCCGGGGTGCTGACGTGTCCTTGCCGGCGGCGAATTACCTGATTCCGGTTGACAGCAAGGGTACCTTCTGCTTCGCTTTTGCTGGAACNATGAGCGGGTTGTCCATTGTAGGCAATATCCAGCAGCAAGGATTTCGGGTCGTGTATGACTTGGCGGGTTCCCGGGTCGGATTTTCCCCGCGAGGGTGCACGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00669	5588	7033	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004190 aspartic-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000669s00020841.1	PF14543.1	TAXi_N	138	304	4.00E-45
Glyur000669s00020841.1	PF14541.1	TAXi_C	325	477	2.00E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	281.905
SRR1783600	control	285.614
SRR1783602	moderate drought stress	75.164
SRR1811619	moderate drought stress	74.310

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	55.155
DRR006520	Root Summer glycyrrhizin high producing strain	54.740
DRR006521	Root Winter glycyrrhizin high producing strain	2.948
DRR006522	Root Winter glycyrrhizin high producing strain	2.796
DRR006523	Root Summer glycyrrhizin low producing strain	34.855
DRR006524	Root Summer glycyrrhizin low producing strain	34.391
DRR006525	Leaf Summer glycyrrhizin high producing strain	16.515
DRR006526	Leaf Summer glycyrrhizin high producing strain	16.506

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	55.904
SRR2868004	Drought Stress (root)	42.209
SRR2967015	Control (root)	52.369

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	64.145
SRR9715740	Leaf	48.645
SRR9715741	Leaf	53.212
SRR9715739	Root	239.090
SRR9715742	Root	186.096
SRR9715743	Root	187.361

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	59.202
SRR8749028	MeJA induced 9h	11.932
SRR8749029	MeJA induced 9h	17.429
SRR8749030	Uninduced	0.863
SRR8749031	Uninduced	0.089
SRR8749032	Uninduced	1.241

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	90.052
SRR8400027	Control - Root	72.979