Gene detail information of Glyur000667s00025249 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70200.1 | 7.00E-42 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| NR | XP_004489882.1 | 8.67E-156 | PREDICTED: uncharacterized protein LOC101488823 [Cicer arietinum] |
| trEMBL | tr|K7K1L1|K7K1L1_SOYBN | 9.00E-145 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G04230.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00667 | 117020 | 119470 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.143 |
| SRR1783600 | control | 3.051 |
| SRR1783602 | moderate drought stress | 2.397 |
| SRR1811619 | moderate drought stress | 2.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.876 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.013 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.478 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.498 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.195 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.890 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.861 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.750 |
| SRR2868004 | Drought Stress (root) | 3.307 |
| SRR2967015 | Control (root) | 3.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.425 |
| SRR9715740 | Leaf | 15.142 |
| SRR9715741 | Leaf | 7.056 |
| SRR9715739 | Root | 0.750 |
| SRR9715742 | Root | 1.358 |
| SRR9715743 | Root | 1.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.087 |
| SRR8749028 | MeJA induced 9h | 3.191 |
| SRR8749029 | MeJA induced 9h | 3.987 |
| SRR8749030 | Uninduced | 1.148 |
| SRR8749031 | Uninduced | 0.305 |
| SRR8749032 | Uninduced | 0.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.531 |
| SRR8400027 | Control - Root | 5.819 |