Gene detail information of Glyur000667s00025245 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G60010.1 | 3.00E-44 | |
| NR | XP_007157496.1 | 2.01E-93 | hypothetical protein PHAVU_002G074400g [Phaseolus vulgaris] |
| trEMBL | tr|V7CJL9|V7CJL9_PHAVU | 7.00E-94 | Uncharacterized protein {ECO:0000313|EMBL:ESW29490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00667 | 80735 | 83513 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000667s00025245.1 | PF14009.1 | DUF4228 | 1 | 186 | 2.50E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.695 |
| SRR1783600 | control | 3.857 |
| SRR1783602 | moderate drought stress | 24.051 |
| SRR1811619 | moderate drought stress | 23.731 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.071 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.132 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.908 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.603 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.177 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.402 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.934 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.824 |
| SRR2868004 | Drought Stress (root) | 18.645 |
| SRR2967015 | Control (root) | 19.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.825 |
| SRR9715740 | Leaf | 11.525 |
| SRR9715741 | Leaf | 7.961 |
| SRR9715739 | Root | 0.776 |
| SRR9715742 | Root | 1.986 |
| SRR9715743 | Root | 2.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.430 |
| SRR8749028 | MeJA induced 9h | 2.153 |
| SRR8749029 | MeJA induced 9h | 0.666 |
| SRR8749030 | Uninduced | 0.330 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.220 |
| SRR8400027 | Control - Root | 4.249 |