Gene detail information of Glyur000665s00020432 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04190.1 | 5.00E-04 | phytochrome kinase substrate 4 |
| NR | XP_004493292.1 | 1.39E-171 | PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 4-like [Cicer arietinum] |
| Swissprot | tr|Q9FYE2|PKS4_ARATH | 1.00E-20 | Protein PHYTOCHROME KINASE SUBSTRATE 4 |
| trEMBL | tr|Q2HUI1|Q2HUI1_MEDTR | 5.00E-157 | Phytochrome kinase substrate 1-like protein, , putative {ECO:0000313|EMBL:ABD28653.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00665 | 120792 | 122372 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.796 |
| SRR1783600 | control | 1.690 |
| SRR1783602 | moderate drought stress | 2.402 |
| SRR1811619 | moderate drought stress | 2.649 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.044 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.685 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.218 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.545 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.670 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.638 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.267 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.091 |
| SRR2868004 | Drought Stress (root) | 6.468 |
| SRR2967015 | Control (root) | 6.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.961 |
| SRR9715740 | Leaf | 1.131 |
| SRR9715741 | Leaf | 1.516 |
| SRR9715739 | Root | 1.146 |
| SRR9715742 | Root | 1.863 |
| SRR9715743 | Root | 1.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.880 |
| SRR8749028 | MeJA induced 9h | 2.134 |
| SRR8749029 | MeJA induced 9h | 1.106 |
| SRR8749030 | Uninduced | 0.551 |
| SRR8749031 | Uninduced | 0.352 |
| SRR8749032 | Uninduced | 0.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.922 |
| SRR8400027 | Control - Root | 5.720 |